Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi445g00025 ATGGATCGGCCTGCGATGACTATTGGGCCAGGAATGGATATGCCGATCATGCATGACAGCGATCGCTATGAACTTGTGCGTGATATTGGTTCTGGAAATTTCGGGGTAGCTAGGCTTATGAGGGACAAACAGACAGATGAACTTGTTGCTGTCAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAAATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTTATATTGACCCCAACACATTTGGCAATTGTAATGGAATATGCTTCCGGAGGAGAGCTATTTGAGAGAATATGCAATGCAGGGCGGTTCAGTGAGGATGAGGCACGCTTCTTTTTCCAACAACTCATATCAGGTGTTAGCTATTGTCATGATATGCAAGTATGCCATCGTGACTTGAAGTTGGAGAACACATTGTTGGATGGCAGTCCTGCTCCTCGTTTGAAGATCTGTGATTTTGGCTATTCAAAGTCCTCTGTGCTACATTCACAACCAAAATCTACTGTTGGTACCCCTGCATATATTGCTCCTGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCGTGTGGTGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAGCCTAAAAATTTCCGCAAGACAATACATAGGATTTTGAATGTTCAGTATTCAATTCCTGACTATGTTCATATATCACCTGAATGTCGTCATCTGATCTCAAGGATTTTTGTTGCTGATCCTGCTAAGAGAATAACTATTCCTGAGATTAAAAAACATGAGTGGTTTTTGAAGAACCTTCCAACTGATCTAATGGATGGGAATACAATGAACAACCAGTTTGAGGAACCTGATCAACCAATGCAAAGCGATGAAGAAATCATGAAGATAATTACTGAGGCTACAATTCCTGCAGCTGGAACTCAGTCTCTGAACCAGTATCTTACTGGTAGCTTGGATATCGATGACGACATGGAGGAGGACTTAGATACTGATCCTGACCTTGATATAGATAGCAGTGGAGAAATAGTTTATGCTATGTAA 1092 0.4112 MDRPAMTIGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKQTDELVAVKYIERGEKIDENVQREIINHKSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHDMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECRHLISRIFVADPAKRITIPEIKKHEWFLKNLPTDLMDGNTMNNQFEEPDQPMQSDEEIMKIITEATIPAAGTQSLNQYLTGSLDIDDDMEEDLDTDPDLDIDSSGEIVYAM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi445g00025 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Sebi445g00025 363 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Sebi445g00025 363 CDD STKc_SnRK2-3 22 278 - -
Sebi445g00025 363 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi445g00025 363 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Sebi445g00025 363 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi445g00025 363 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Sebi445g00025 363 PANTHER SERINE/THREONINE KINASE 22 305 - -
Sebi445g00025 363 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Sebi445g00025 363 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Sebi445g00025 363 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi445g00025 363 SUPERFAMILY Protein kinase-like (PK-like) 15 292 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi445g00025 Sebi-Chr445 800734 803971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi445g00025 16 302 CBL-interacting serine-threonine protein kinases AT4G24400 42.525 6.10e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sebi445g00025 Pkinase 6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi445g00025 K14498 - qsu:112032862 677.167