LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi445g00003	ATGGCTTCAACCGATGTTGTCCACGAGTTCCCTCAACTCTTCCGTCTCTACAAAGACGGCCACGTCGAACGGTTTCTCGGCGTCGAAACCGTCCCATCCGGCACCGACTCCCTAACCGGCGTTCAATCCAAAGACGTCACAATCAACCCCCAAACCGGCCTCTCTGCCCGCCTCTACCTCCCTCCAACCGCCGCCTCTTCTTCCCAAAAACTCCCTCTCCTTATCTACATCCACGGCGGCGCCTTCTGCGTCTGCTCCCCCGCCAACCCCGCCTACCACAGCCACCTCAACACTGTCTCCGCCGAAGCAAACGTCGTCGTTGTCTCCGTCGACTACAGGCTCGCCCCTGAGCACCCTCTCCCATCGCCTACGACGACTCCTGGGAGGCCGTTCAATGGGCCGCAGGCGCTTCCGAGGCGTGGATCAAGGACCACGCCGATCTCGGAATCGTGTTCTTCGCCGGAGACAGCGCCGGAGCGAATCTGGCACATAATGTGGCGATACGAGGAGAGGGATGAACTGGTAGCGTTTCTTTACCCGACGTATGGAGGAGTCGATGACCTGAAGATCCATGCGCAGAAGGATCCGAAGCTTTCGGATCTCGGGTGCCCGAAGGTGTTGGTTTTTGTGGCGGGGATGGATCTTCTGAAGGAGAGAGGAAAGAGCTATTATGAGGCGCTGAAGAAGAGTGGGTGGAGTGGGTCAGTGGAATTAGTGGAGACTGAAGGAGAGAACCACGTGTTCCATCTGTTTGACCCCACCAAGGAAAACTCTGCGGCAATTGTGAAACAGTTTGTCTCTTTTATGAAACAAGTCGAGAAAGACGTGCGTGCGTAG	837	0.5675	MASTDVVHEFPQLFRLYKDGHVERFLGVETVPSGTDSLTGVQSKDVTINPQTGLSARLYLPPTAASSSQKLPLLIYIHGGAFCVCSPANPAYHSHLNTVSAEANVVVVSVDYRLAPEHPLPSPTTTPGRPFNGPQALPRRGSRTTPISESCSSPETAPERIWHIMWRYEERDELVAFLYPTYGGVDDLKIHAQKDPKLSDLGCPKVLVFVAGMDLLKERGKSYYEALKKSGWSGSVELVETEGENHVFHLFDPTKENSAAIVKQFVSFMKQVEKDVRA	278

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi445g00003	278	Gene3D	alpha/beta hydrolase	145	276	IPR029058	-
	Sebi445g00003	278	MobiDBLite	consensus disorder prediction	138	154	-	-
	Sebi445g00003	278	Gene3D	alpha/beta hydrolase	12	128	IPR029058	-
	Sebi445g00003	278	Pfam	alpha/beta hydrolase fold	200	249	IPR013094	GO:0016787
	Sebi445g00003	278	Pfam	alpha/beta hydrolase fold	74	123	IPR013094	GO:0016787
	Sebi445g00003	278	PANTHER	ARYLACETAMIDE DEACETYLASE	166	255	-	-
	Sebi445g00003	278	SUPERFAMILY	alpha/beta-Hydrolases	26	272	IPR029058	-
	Sebi445g00003	278	MobiDBLite	consensus disorder prediction	117	154	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi445g00003	Sebi-Chr445	39313	40223	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi445g00003	4	271	Carbohydrate Esterase	AT1G19190	30.063	1.18e-44	152

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi445g00003	-		-	mtr:11445231	320.087

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