Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi444g00023 ATGATTCCGCCGCCACTTCATCTCTCCGATAATACCGCCACCATGCCCGTCCCGGAGTCTCCTTCTTCCGGAGACTTCCACGTGGCAATTGGCAGTTCCAATTTCCCTGGAGATTCGTCGCTACTGAGCCCTCCGCAAAATCCAAGCCATGCTACTCGCATTGAAGAAAAGAGGGAAGAGAAAGAGGTTCTGCAATCAAGTTCGAAGCCGATGAAAGCAAAAACTACAAAGGCTGAGAGACGAGCCTTGCAGGAGGCGCAACGAGCTGCTAAAGCTGCTTCTAAAGCTGATGGATGTAAAGCACTTGCTGAATCTGGGAGAGCAGCCCCAGGTAAAAATGCAAAGCAGACTTCACAAAAGAAAGATGGTCCTCCCGCTACATCTCCTGTGGCTACCGATAAGAAAGCAGGAGATCATCCTTTGGGGAAAGATAGGAAAAAGGAGGCTCCTCCTCCGAGAATGCAATTTGATGACAAAAAACGAGTGGAAAAGGCTAAAAGGCGTTCAGTAGTGAATCCAACTGAATCTAGAAACAGAGTTGAATTGTTTCAGCATTTGCCTCAATATGAACACAGGACTCAGCTTCCTAATCTTGAATCGAAGTTTTTCCACATTGATTCAGTGCATCCTGCTGTGTTCAAGGTGGTTTTTCAATCAAAACGGGAATTGTTTGCGTTATTTGACAGGAGATATAGCAGGGGCAATGCTCGTTGTATTGCGATGCTAAGAGCATTTCAAGATGCTATTAGAGACTACTGCACACCAGATGATAAAATCCTTTTTAGGGATTTAACTTCAAAATTCAGTAGTTATGTATCATTTTTTACTGAATGCAGACCACTTTCTATGAGCATGGGAAATGCAATTAGGTTTGTTAAGAGTCGTATTGTCAATTTGCCTTTAAGTCTTTCTGAATCTGAGGCAAAAACAGCTCTGTCTTCTGATATTGACCGGTTCATTAATGAGAAAATAATTCTTGCTGATAAGGTGATTGTTAGACATGCTTTTACAAAGGTTAAGGATGGGGATGTTCTTCTCACATATGGATTGTCATGTGTGGTTGAGATGATTCTTTTTTATGCCCATGATCTTGGAAAACAGTTCCGTGTTGTGGTGGTAGACTCGCGGCCAAAGCTTGAAGGCCAGGCCTTACTTCGTAGGCTAGTGGCTAAGGGCCTGAATTGCACATACACTCATATAAACGCTGTTTCTTACATAATGCACGAGGTCACACGGGTTTTTCTTGGAGCTTCAGCAGTTTTGTCTAATGGAACTGTATATTCTCGGGTTGGGACTTCATGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCAACTAGATTCACTTTGTTCGAATGAACTAGGTGATCCAGATGCTGTTGCTAGAGTTCCAGGACGAATGGATGTCAATTATCTGGACAATTGGACTAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCTCTGCCATTGTTACGGATTATGGCATGTATCCGGTTTAG 1572 0.4281 MIPPPLHLSDNTATMPVPESPSSGDFHVAIGSSNFPGDSSLLSPPQNPSHATRIEEKREEKEVLQSSSKPMKAKTTKAERRALQEAQRAAKAASKADGCKALAESGRAAPGKNAKQTSQKKDGPPATSPVATDKKAGDHPLGKDRKKEAPPPRMQFDDKKRVEKAKRRSVVNPTESRNRVELFQHLPQYEHRTQLPNLESKFFHIDSVHPAVFKVVFQSKRELFALFDRRYSRGNARCIAMLRAFQDAIRDYCTPDDKILFRDLTSKFSSYVSFFTECRPLSMSMGNAIRFVKSRIVNLPLSLSESEAKTALSSDIDRFINEKIILADKVIVRHAFTKVKDGDVLLTYGLSCVVEMILFYAHDLGKQFRVVVVDSRPKLEGQALLRRLVAKGLNCTYTHINAVSYIMHEVTRVFLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFHERVQLDSLCSNELGDPDAVARVPGRMDVNYLDNWTSEDNLRLLNLMYDATPSDYVSAIVTDYGMYPV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi444g00023 523 MobiDBLite consensus disorder prediction 26 50 - -
Sebi444g00023 523 MobiDBLite consensus disorder prediction 51 86 - -
Sebi444g00023 523 MobiDBLite consensus disorder prediction 111 125 - -
Sebi444g00023 523 SUPERFAMILY NagB/RpiA/CoA transferase-like 221 522 IPR037171 -
Sebi444g00023 523 MobiDBLite consensus disorder prediction 136 173 - -
Sebi444g00023 523 MobiDBLite consensus disorder prediction 1 173 - -
Sebi444g00023 523 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 49 522 - -
Sebi444g00023 523 Pfam Initiation factor 2 subunit family 235 522 IPR000649 GO:0044237
Sebi444g00023 523 Gene3D - 327 523 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi444g00023 Sebi-Chr444 186262 189568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi444g00023 54 522 Eukaryotic Initiation Factors Gene Family AT5G38640 66.183 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi444g00023 K03680 - gmx:100795256 755.747