Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi444g00013 ATGGCCACTCTCTCCTTCAAAGCCTCATACCCATTTTTCCTTTGCTTGATTCTTTTCTGTGGCTCTCAAGTATTGCTTATCAATTGTACTGAATTTGAAGTTGGTGGTAAAGATGGTTGGGTTGTCCCAAAATCAAAGGACAATTCTGATATGTATAACCAATGGGCATCCCAAAACAGATTCAAAGTTAATGACACTGTTCGTTTCAAGTATGAGAAAGATTCTGTTTTGGTGGTGACTGAAGAAGAGTATGGAAAATGCAAATCTTCACGTCCTCTTTTTTTCTCTAACAATGGTGACACTATCTACAAATTTGATCGACCTGGCATGTTCTATTTCATTAGTGGGGTTAGTGGTCACTGTGACAGAGGGCAGAAGATGATCATTAAGGTTTTGAATGTAGAGCCAGCAGCACCTTCACCCCAATCTGCAAATGAGAGTGCACAGAAATCACCTTCTAATGGTGGAGTTGTTGGAATGGCTCCTTTGAGGATCACAACATTGACACTTTTTGTTTTGTCACTCTTGGCCCTGCTTTATGCTTGA 546 0.4029 MATLSFKASYPFFLCLILFCGSQVLLINCTEFEVGGKDGWVVPKSKDNSDMYNQWASQNRFKVNDTVRFKYEKDSVLVVTEEEYGKCKSSRPLFFSNNGDTIYKFDRPGMFYFISGVSGHCDRGQKMIIKVLNVEPAAPSPQSANESAQKSPSNGGVVGMAPLRITTLTLFVLSLLALLYA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi444g00013 181 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Sebi444g00013 181 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Sebi444g00013 181 CDD OsENODL1_like 30 132 IPR041846 -
Sebi444g00013 181 Gene3D - 29 136 IPR008972 -
Sebi444g00013 181 Pfam Plastocyanin-like domain 48 125 IPR003245 GO:0009055
Sebi444g00013 181 PANTHER BLUE COPPER PROTEIN 30 143 IPR039391 GO:0009055
Sebi444g00013 181 FunFam Early nodulin-like protein 1 29 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi444g00013 Sebi-Chr444 110793 111445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi444g00013 13 173 Phytocyanin Superfamily AT1G48940 50.292 5.56e-61 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi444g00013 - - gmx:102667643 258.84