Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi444g00001 ATGGAGATTACTGCCATGGCTTCAACCACTCCAAGACCTTCTCTTCCAGCTCCTTCCACTTCACCTCACACTGTTAGCACCTTCTGCAAGAGACCCTCTCACATATCACTACCAACCTCAACAGCCATTTCACTTCTTGCCCTTTTTGCCCCTCCCAATGAAGCCAAAGCCGCTGTTAGCATCTCCAAGGACCAGATTGTCTCTTCTCTCACCCAAGTGGAGCAAACGATTGATCAGGTTCAGGAGGTGGGTTCGAGTTTCTTCGACACGGCACAGCGTGTTGCTGAAGCTATAGGGAATGCTTTGAAGCCTGGCATTGAAACGGCGTTGCCAATTGTGCAGCAGGCAGGGGAAGAGGCCTTGAAAATTGCTTCTCCAGCTATCTCTGAGGCCTCCAAGAAGGCACAAGAAGCACTCCAAAGCTCTGGTGTTAATACTGAACCTGTTCTCACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACGACCAAGGTGATTGAAGGTGCCAAGCCAATTGCTTCATCAACAGTGGAAACTATATCTTCTTCAGATCCTACCGTGATTGCGGGAACAGCTGGAGCACTATTTATTGCATACCTCTTGCTTCCTCCTATCTGGTCTACCATCTCCTTTAATCTCCGTGGTTACAAAGGAGACTTGACACCAGCTCAAACACTTGATCTGATATCAACACAAAACTACATTTTGATTGATATTAGGTCAGAGAAAGATAAGGATAAGGCTGGTATCCCTCGCCTTCCCTCTAGTGCTAAAAACAAGATGATTCCCATTCCTTTGGAAGAACTGCCAAACAAGCTAAGAGGACTGGTCAGGAATGTGAAGAAAGTGGAAGCTGAAATAGCAGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACCAACATTGTGATCTTGGACTCGTACTCAGACTTGGCAAAAATAGTTGCAAGGACACTAACGGGACTTGGTTTTAAGAACACGTGGATTGTTGCTGATGGGTTTTCTGGAAGCAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCATATAACTTTTCGTTTGCAGAGATTCTGTCACCATCCAGAGTCATCCCTTCTGCTGTGAGAGGTTTAGGTACAACTAGTGGGAAACTTCTTCCTGGGGCTGACTGA 1161 0.4582 MEITAMASTTPRPSLPAPSTSPHTVSTFCKRPSHISLPTSTAISLLALFAPPNEAKAAVSISKDQIVSSLTQVEQTIDQVQEVGSSFFDTAQRVAEAIGNALKPGIETALPIVQQAGEEALKIASPAISEASKKAQEALQSSGVNTEPVLTAAKTVADAAQQTTKVIEGAKPIASSTVETISSSDPTVIAGTAGALFIAYLLLPPIWSTISFNLRGYKGDLTPAQTLDLISTQNYILIDIRSEKDKDKAGIPRLPSSAKNKMIPIPLEELPNKLRGLVRNVKKVEAEIAALKISYLKKINKGTNIVILDSYSDLAKIVARTLTGLGFKNTWIVADGFSGSKGWLQSRLGTDSYNFSFAEILSPSRVIPSAVRGLGTTSGKLLPGAD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi444g00001 386 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 8 350 IPR044690 GO:0009704|GO:0071277|GO:0090333
Sebi444g00001 386 MobiDBLite consensus disorder prediction 1 26 - -
Sebi444g00001 386 Coils Coil 267 294 - -
Sebi444g00001 386 SMART rhod_4 221 349 IPR001763 -
Sebi444g00001 386 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 197 339 IPR036873 -
Sebi444g00001 386 CDD RHOD 225 339 - -
Sebi444g00001 386 Gene3D - 219 356 IPR036873 -
Sebi444g00001 386 ProSiteProfiles Rhodanese domain profile. 231 352 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi444g00001 Sebi-Chr444 3241 6074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi444g00001 5 310 Sulfurtransferasese or Rhodanese AT5G23060 71.197 2.60e-155 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi444g00001 - - gmx:100806845 630.172