Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi443g00030 CTCCACAAGGTGGTGCTCCTTTGTTTGTGTCTCTCCTTCTGGTCCTTTCCCCTCTGGGGTTGCACCTTTTACCCTTTCTTTATCTCACCGGAGTCCCAGAGGCTCTCTGAACAAAATGCACAAACCCCAACTGGTCAACGTGTGTCTGCTACCCCAATATCTTCTGCAGTTCCAATTAATTCATTTAGGACACCAACTGCTGGGGCTGCAAATGGAGATGTGGGTGGTTCATCACGGAGGAATAACCGGAGTCGTGGACAGTTCACAGAGGAAGATGGCTATGTTGAGATGAATGAAGTTGATGCAGAAGATGGAACTGGGGATGGGAGGACCAGACGCAGACAGAAGAGGGCAAAGGGACGGCGCGCTAGCGTTGGCGGTTCTGTTGATGTTGATCCGGATGCATTGGCTAATGAGATTCTCAAATCAATGAACCCCGCAGTTTTTGATGTTCTAAATCAACCTGATGGTAGCAGGGACTCGGTTGCATATACGCTTTTGATATATGAAGTGCTAAAAAGAAAGCTTGGACAAGTTGAAGAGACAACAAAGGAAGCCAGTTCTGGAGCAAAGCGGCCTGATTTGAAGGCAGGTACAATTATGATGAGTAAAGGGGTTCGGACTAACAGCAAGAAACGTATTGGAGTTGTGCCTGGTGTTGAGATTGGGGATATTTTCTTTTTTAGATTTGAATTATGTTTAGTAGGATTACATGCTCCTTCTATGGCTGGAATTGATTACTTGGGTTCCAAAACCAGTCAAGAGGAAGAGCCATTAGCTGTAAGTATTGTCTCATCTGGAGGGTATGAAGATAATGTGGAGGATGGGGCTGTGCTGATTTACAGTGGTCAAGGTGGGTCTAGTCGTGAAAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCATTGGAAAAGAGCCTGCATAGAGGTAATGAAGTGAGAGTAATTAGGGGTATGAGGGATGTAGCACATCCAACTGGGAAGGTATATGTCTATGATGGTCTTTACAAGATTCAGGATTCGTGGGTGGAGAAAGCAAAATCTGGCTTCAATGTATTTAAGTATAAACTAGTCAGGTTGCCTGGGCAGCCTGAAGCATATATGGTATGGAAATCCATTCAACAATGGACTGAGAAGTCTGTTTCAAGATCGGGGGTTATACTTCCTGATCTTACATCTGGGGCTGAAAATTTACCTGTTTGTCTTGTAAATGATGTTGATAATGAGAAGGGCCCTGCATATTTCACTTACTCCCCTACTCTCAAGAATTTGAAGCCAATAGCTCCTGTGGAATCTTCTGCTGGATGTTCTTGTGTTGGCGGATGCCAGATTGGCAATTTTAACTGTACTTGCATCCAAAAGAATGGAGGTTATCTCCCATATTCTGCAACTGCAGTACTTGCGGATCTAAAGTCTGTGGTATATGAGTGTGGTCCTTCTTGTCAGTGCCCTCCTAATTGCCGAAATCGGGTTTCCCAAGGTGGCTTGAAACTTCGTTTGGAGGTGTTTAGGACAAAGGATAAAGGTTGGGGTCTAAGATCATGGGATCCTATTCGTGCTGGAGCTTTCATATGTGAGTATGCAGGGGAAGTCATAGATAATGCTAGAGTAGAGGAGCTTGGCGGTGAAAATGAAGATGACTACATTTTTGACTCTACTCGCATATATCAGCAACTGGAAATTTTTCCTGGTGACACTGAAGCACCAAAGATCCCATTCCCCCTTTATATAACAGCAAAAAATGAAGGCAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTATTATGGCGTCCAGTCTTACGCGAAAACAAGAATGAATCAGATCTCCACATTGCTTTCTATGCAATTAGACATATCCCTCCTATGGTAGAGTTAACCTATGATTATGGAATTGTTCTTCCTCTCAAAGTAGGTCAGAAGAAGAAGAAATGCTTGTGTGGATCTGTGAGATGCAGGGGTTACTTTTGTTAA 1986 0.4376 LHKVVLLCLCLSFWSFPLWGCTFYPFFISPESQRLSEQNAQTPTGQRVSATPISSAVPINSFRTPTAGAANGDVGGSSRRNNRSRGQFTEEDGYVEMNEVDAEDGTGDGRTRRRQKRAKGRRASVGGSVDVDPDALANEILKSMNPAVFDVLNQPDGSRDSVAYTLLIYEVLKRKLGQVEETTKEASSGAKRPDLKAGTIMMSKGVRTNSKKRIGVVPGVEIGDIFFFRFELCLVGLHAPSMAGIDYLGSKTSQEEEPLAVSIVSSGGYEDNVEDGAVLIYSGQGGSSREKGASDQKLERGNLALEKSLHRGNEVRVIRGMRDVAHPTGKVYVYDGLYKIQDSWVEKAKSGFNVFKYKLVRLPGQPEAYMVWKSIQQWTEKSVSRSGVILPDLTSGAENLPVCLVNDVDNEKGPAYFTYSPTLKNLKPIAPVESSAGCSCVGGCQIGNFNCTCIQKNGGYLPYSATAVLADLKSVVYECGPSCQCPPNCRNRVSQGGLKLRLEVFRTKDKGWGLRSWDPIRAGAFICEYAGEVIDNARVEELGGENEDDYIFDSTRIYQQLEIFPGDTEAPKIPFPLYITAKNEGNVARFMNHSCSPNVLWRPVLRENKNESDLHIAFYAIRHIPPMVELTYDYGIVLPLKVGQKKKKCLCGSVRCRGYFC 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi443g00030 661 Gene3D SET domain 383 660 IPR046341 -
Sebi443g00030 661 ProSiteProfiles YDG domain profile. 215 361 IPR003105 -
Sebi443g00030 661 ProSiteProfiles Post-SET domain profile. 645 661 IPR003616 -
Sebi443g00030 661 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 198 380 - -
Sebi443g00030 661 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 64 660 IPR025794 GO:0016571
Sebi443g00030 661 Pfam SAD/SRA domain 214 365 IPR003105 -
Sebi443g00030 661 Pfam Pre-SET motif 394 492 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi443g00030 661 SMART preset_2 390 484 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi443g00030 661 SUPERFAMILY PUA domain-like 197 380 IPR015947 -
Sebi443g00030 661 SUPERFAMILY SET domain 376 641 IPR046341 -
Sebi443g00030 661 Gene3D - 197 382 IPR036987 -
Sebi443g00030 661 ProSiteProfiles SET domain profile. 500 635 IPR001214 GO:0005515
Sebi443g00030 661 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 79 653 - -
Sebi443g00030 661 SMART G9a_1 210 365 IPR003105 -
Sebi443g00030 661 MobiDBLite consensus disorder prediction 59 129 - -
Sebi443g00030 661 Pfam SET domain 511 635 IPR001214 GO:0005515
Sebi443g00030 661 ProSiteProfiles Pre-SET domain profile. 436 497 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi443g00030 661 SMART set_7 500 641 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi443g00030 Sebi-Chr443 827210 829195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi443g00030 22 660 Su(var)3-9 homologs AT1G73100 48.706 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi443g00030 SAD_SRA 1.5e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi443g00030 K24405 - gmx:100805932 1092.03