Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi443g00022 ATGGAGGAAGTTGACGGCCACATTTCTGAGACAGAGACAACGATGAATAGTGTTGACCAAACACATGAGCAGACCGGTGAAGAAGGTGAAGATGGAGTTCCGTTTACCGATGGTCCTACCGTTATTGATAGCGATGATAGTTGTGGTGAAAATGAAAGTGGGGATAAATATAGGATTGATGGAGAGGATGACATTAGAAAAGTTGACTTGATTATGTTAAGTGAAGAAGAGTTCAAGATGTACCATTTCAGCAGTCGATTGGTTGCATTTCAGTTTTACAATAAGTATGGTGAGAAAAGGGGATTTGCTGCTCGAAGATGGAACACAGTTGTAAACAAGGAAGGCATAGTGTCACAACAAACATTTGTGTGTTTTAGAGAAGGTTATCGATTGAAAAAACATTTGAAGAAGGAGAATCGTAAGAGGGAGGCGAGAGCAATTACTAGGTGTGGTTGTTTTGCTTACCTGAAAGTTCGATTTGCACGCGAGGTATGTTGTTGGATTGTTAAAGCTTTTTGTGATGAGCATAGCCATGAACTGTTACCCAGGAAATATGAGGGAATGTTGAGTTCACACCTGAAGATGAGTGAGACAGACATAATTCAAATGAATACTATGCGTGAAGTTGGTATTGGTGTAACTCAAATATATGGGTTAGCGGCGAATCAATCTGGAGGGTATGAGAATGTTGGTTACAAGAAAAGTGATATGTACAATGAAATTTTCAAGCAACGAAGATCTGATGGTAGTGATGCGAGAGGCGCATTATCGTATCTTCGAGCAATGGGTCGCAATGATAAGGACTTGTTTTGGTCTCATACTGTGGATGAAGAAGGGAGGCTGAAACATCTATTTTGGAGTGATGGTAGAAGCCAAGGGGACTACAAAGTGTTTGGTGATGTGCTGGCATTTGATGCAACATATAGAAGGAACAAGTATATGTCACCTCTTGTTGTATTTGCAGGAGTAAACCATCATAATCAAACCATTGTGTTTGGTAGTGCACTTGTAGCTAATGAAACAGAAGAGACCTATGTGTGGTTACTCAAAGAGTTTTTACGTGGCAAAAAAAAGGTAGAACTGTATGAGAAGAAGAAAATGTGGGCTACAGCCCACATACGTGGGAGTTTCTTTGCTGGGTTTCGGACGACATCCAGGTGTGAGGGTCTTCATTCTCAAGTAGGCAGGCAGAAGGAGTTGGAGGCTGACTATGAGTCAATTAATGGAGATCCTGTTTTACAAACACCTTTCGAAGATATTGAAGCAGCTGGTGCTAAGTTGTATACAAGGAAGGTTTTTATGAAGTTTAGAGTAATGCTTTGGAGGGCATGTAAGCTGGAGGTTAGTGGATGTGCGCGGACCCCAAACTGTCACATATATATAGTGTCAAACAGATCAACAAGTGTTAGGGAGTGGCATGTCTCATATGTATCACAAAATGAGGAAGTGAAGTGTTCCTGTCAGCGGACGGAGTCATTGGGTATCCCATGTGAGCATATTGTTGTCCTATTACATTACCTTGATATAAAGCAACTGCCAAAATCGCTTATATTTGATAGGTGGACAAAATATGCCAAACAATGTGTGGATGGTGCTGATATGGCAACTACTACTAATGTTGGTTCTATGTGGAAGAGTGAAGTAATGTCATTGTTGTTTGATTGTTGTGAGATGTGCAGACTTGCAGGCAAAAGGATTGATAAATTGGAGGAGACTAGAGGAGTTATTAGGAATCATATGCAAAGTTTGAAAGAGAATTCGGCAGAAGAAAATGGTGATGAAGATAATGACGGGGAAGGCTAA 1803 0.4065 MEEVDGHISETETTMNSVDQTHEQTGEEGEDGVPFTDGPTVIDSDDSCGENESGDKYRIDGEDDIRKVDLIMLSEEEFKMYHFSSRLVAFQFYNKYGEKRGFAARRWNTVVNKEGIVSQQTFVCFREGYRLKKHLKKENRKREARAITRCGCFAYLKVRFAREVCCWIVKAFCDEHSHELLPRKYEGMLSSHLKMSETDIIQMNTMREVGIGVTQIYGLAANQSGGYENVGYKKSDMYNEIFKQRRSDGSDARGALSYLRAMGRNDKDLFWSHTVDEEGRLKHLFWSDGRSQGDYKVFGDVLAFDATYRRNKYMSPLVVFAGVNHHNQTIVFGSALVANETEETYVWLLKEFLRGKKKVELYEKKKMWATAHIRGSFFAGFRTTSRCEGLHSQVGRQKELEADYESINGDPVLQTPFEDIEAAGAKLYTRKVFMKFRVMLWRACKLEVSGCARTPNCHIYIVSNRSTSVREWHVSYVSQNEEVKCSCQRTESLGIPCEHIVVLLHYLDIKQLPKSLIFDRWTKYAKQCVDGADMATTTNVGSMWKSEVMSLLFDCCEMCRLAGKRIDKLEETRGVIRNHMQSLKENSAEENGDEDNDGEG 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi443g00022 600 ProSiteProfiles Zinc finger SWIM-type profile. 472 508 IPR007527 GO:0008270
Sebi443g00022 600 PANTHER OS01G0519700 PROTEIN 396 578 - -
Sebi443g00022 600 Pfam SWIM zinc finger 478 507 IPR007527 GO:0008270
Sebi443g00022 600 Coils Coil 566 586 - -
Sebi443g00022 600 Pfam MULE transposase domain 301 361 IPR018289 -
Sebi443g00022 600 MobiDBLite consensus disorder prediction 579 600 - -
Sebi443g00022 600 Pfam FAR1 DNA-binding domain 91 182 IPR004330 -
Sebi443g00022 600 SMART 26again6 483 510 IPR006564 GO:0008270
Sebi443g00022 600 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi443g00022 Sebi-Chr443 691175 693279 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi443g00022 FAR1 3.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi443g00022 - - vvo:131661205 335.109