Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi443g00016 ATGCCACACCTACTGGGGCAAGTGGGAAACAACGTTTACGTTGGACATCCGATCTTCATGACCGTTTTGTGGATGCAATTACACAACTTGGTGGACCAGATAGTGGGGGCAACGCCAAAAGGGGTTCTAAGAGTGATGGGTGTACCTGGACTTACCATTTATCACGTTAAAAGTCATTTACAGAAATATCGCCTTGCAAAGTATTTGCCAGAATCACCAGCTGATGGAAAAGGTGCCTTGTTTATTTCTTTCCCTTCCTCCCCTGAAACAAATTATTTAGAAATGCCTTGTTGTTTTCATTTCACTTCTTCATTGAGTCAGTTGGAGTTCTTTTCTGGACTTTCAGACTCTAAAGATGAGAAAAGGAATTCTGGAGATTGCATTTCTGGCACAGATTCTTCCCCGGGATTGCAAATCAATGATGCTTTAAGAATGCAGATGGAGGTTCAGAAACGTTTGCATGAACAGCTTGAGGTTCAGAAGCAGTTACAAATGAGAATTGAAGCACAGGGTAAATACTTGCAGAAGATTATAGAGGAACAGCAGAAATTAGGTAGTACCTTGACAACCTCAGAAACGCTTCCATTGTCCCATGATAAGCAAAACCATCCCCAGTCAGAGCCTTCTGGATCTAGTGATGCCCTTGCAGGCACTTTTTCTCCACATAAAAAACAGAGAATTGATGATGGTTCAAAGGATGTCCGCACAGAAGAATGA 717 0.4212 MPHLLGQVGNNVYVGHPIFMTVLWMQLHNLVDQIVGATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKGALFISFPSSPETNYLEMPCCFHFTSSLSQLEFFSGLSDSKDEKRNSGDCISGTDSSPGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTTSETLPLSHDKQNHPQSEPSGSSDALAGTFSPHKKQRIDDGSKDVRTEE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi443g00016 238 Gene3D - 7 69 - -
Sebi443g00016 238 SUPERFAMILY Homeodomain-like 36 65 IPR009057 -
Sebi443g00016 238 MobiDBLite consensus disorder prediction 191 218 - -
Sebi443g00016 238 MobiDBLite consensus disorder prediction 222 238 - -
Sebi443g00016 238 Coils Coil 140 160 - -
Sebi443g00016 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 37 213 IPR044848 GO:0003700
Sebi443g00016 238 Pfam MYB-CC type transfactor, LHEQLE motif 137 183 IPR025756 -
Sebi443g00016 238 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 66 IPR006447 GO:0003677
Sebi443g00016 238 MobiDBLite consensus disorder prediction 191 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi443g00016 Sebi-Chr443 446512 449349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi443g00016 46 188 G2-like Transcription Factor Family AT2G01060 53.846 6.70e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi443g00016 Myb_CC_LHEQLE 4.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi443g00016 - - tpra:123889278 260.766