Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi442g00034 ATGACCATTTTGGATGCTCTGTTAGGAACCGCCAATGTTGCATTCTTCTATGTAATTTTGATATGGATTTTACTTCACAGTTTAACACAGAGCAAGCGTAACCATGTTGAGTATAATTCCAAACACTCACCAACATTCTTCGCTAAAATCACTTTTCTCTTAAGTGTTGTTATCTCCGTTTCGAACATGGCTCTTGCATTTTATGAATACACCACTCAGAGAATCATAGGGTTTAACTCTGTTTCCTTGGCTCTAACTTGGGTTTTAGCAACCGTAGTTTCGTTTTATTCATTGAAGACAACACTCAAGGAGAACAAACGGTTCCCGTTTGTGCTAATTCTATGGTGGATCTTTGCTAGTGTTGTAGATGTATTCTTAGTTTCTTTAGTGCTAGTGAAAAATCTAGAATCCTTGAATTTGTGGATTTTTTTGTTGGAGGATAATGTAGTTGATGCGGTTTCCTTGCCTATGCTGTTGCTTCTGTGTTTCAATGCACTGCCTAATGTTTCTGCAAGGGAACAAAGTGACATGGAACAACGGTTACTTCAGAAAGAGTTGGAATTTTCAAGGGAAGAAGGTGAAGGGGTCTTCACAAATGCAAGCATGTGGAGCAAACTCACGTTTAGATGGCTGAATCCTATATTTAACAGGGGTCGGATTCAGAAACTTGAACTTGCGCATATTCCTTCTGTTCCTCATTCTGAAACTGCAGAAAGTGCTTCTTTCATGTTGCTAGAATCGCTTCGCAAACAGAAACTTGAAGGGGGTTCTTTGACAAAAGCTATCACACATTCTATATGGAAATCCTTGGCCTTAAATGCAATTTTAGCAGGGGTTAATACTATTGCCTCTTATATTGGTCCATTGTTGATCTCAAGCTTTGTGAATTTTTTATTGGAGAATAATAGTAATAATAATTCAAGCATCCAATATGGTTTGATTCTTGCATTCATTTTCTTCCTGTCAAAGACGGTGGAGTCTCTGAGTCAGAGACAATGGTACTTTGGTGCTCAACGAATTGGAATTCAGGTGCGTGCAGCTCTTATGGCTTTGGTTTATAGCAAGTCCCTTATGATGAAGTGTGCTGGGCCTACACATGGTAAAGTCATAAATTTGATCAATGTGGATGTTGAAAGAATTGGGGATTTCTGTTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAGGTCATTTTGGCCTTGGTAATCTTGTACATAAACCTGGGTTCTACCCCTTCATTTGCTGCTCTTGCTGTCACCATTTTGGTCATGGTGTGTAACACACCTTTAGCTAATATGCAAGAAAATTTGCACTCCAAGATCATGGAAACTAAGGATTCAAGAATCAAAGTGACTTCAGAAACCATGAAGAATATCAGAATTTTAAAACTGCATTCATGGGAATCCACATTCTTGCAGAAAATCCTCCAACTTAGGGACACTGAGAGGAGTTGGCTGCAGAAATACCTCTACACATGCTCAGCAGTAGCCACTCTGTTCTGGGCATCTCCAACTTTAGTTTCTGTTGTCACTTTTGGTGCTTGTATACTGGTGAAAACAGAACTAACAGCAGCTAAAGTCCTCTCAGCTTTGGCTACATTTCGTATCTTACAAGAACCAATTTACAACTTACCTGAGCTCATTTCCATGATAACTCAAACAAAAGTCTCTATTGATCGAATCCAGGAGTTCATTAAGGAAGAGGATCAAAACCAATTCATGAATAGGCATGCTTTGGAAACTTCATCAGTTGCTATTGAAATCAAACCAGGTGAATATGCGTGGGAAACAAATGATCACACCCACAAGAAACCAACTATTCAAATTACAAAAAAGTTAACGATAAAGAAAGGTCAGAAGGTTGCAATTTGTGGGTCAGTGGGGTCTGGCAAATCAAGCTTGCTCTACTGCATGCTTGGTGAGATTCCATTAGTTTCTGGGGCGGTTACCAAAGTCTATGGGACTAGAAGTTATGTACCTCAAAGTCCCTGGATTCAATCTGGAACTGACATCAACATGTGGAGTGATGGAGATTTGACCCTGGTGGAGGAGAGGGGCATAAACTTAAGTGGAGGGCAGAAACAACGAATTCAACTGGCAAGAGCTGTTTACAATGATTCAGATATTTATTTCCTTGATGATCCTTTTAGTGCTGTTGATGCTCATACTGGAACTCATTTGTTTAAGAAATGTCTTATGAAACTTTTATACGATAAAACGGTTGTGTATGCTACCCACCAACTGGAATTTTTGGAAGCTGCGGATCTCATTTTAGTAATGAAAGATGGAAAAATTGTTGAGTTTGGAAGGTATAATGATCTCATAGCATGTCCCAATAGTGAACTCGTTCAACAAATGGCTGCCCATCAAGAAACAGTAAACCAAATAAATCCATGCCAAGAAGATGATCCTGTTAACTGCAAATCTTGCCACAAAAGTCAAATTGACGCTGTTGAAGAAAATATTCAAGAGACCATCATGGATTGGAAGAGAACCAGAGAAGAGGAAGCAATGACAGGACGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACATCAGCTTATAAAGGAGCACTTGTTCCTGTTATTCTTCTCTGTCAAATTCTCTTTCAAGTTATGCAGATGGGAAGCAATTATTGGATTTCCTGGGCCACAGAAGAGAAGGACAGGGTCAGCAAAGGGCAGCTTATGGGAACATTTATTCTTTTGTCAGGTGGCAGCTCCATCTTCATACTGGGAAGGACTGTTTTAATGGCTACAGTTTCCGTGGAGACTGCTCAGCGTCTTTTTCATGGAATGATCACATCAGTTTTCAGGGCACCTGTTTCATTTTTTGACACCACACCTTCAAGCCGAATTCTGAGCAGGTCATCAACGGATCAAAGTACAGTAGACACAGACATACCATACAGATTAGCTGGACTAGTATTTGCACTTATCCAGTTATTGAGTATCATCATGCTAATGTCCCAGGTTGCCTGGCAAGTCATTCTCCTCTTTTTTGCAGTCCTTGCTATCTCCATCTGGTATCAGGCTTATTACATCACTACGGCCAGGGAATTAGCCAGGATGGTAGGGATCCGAAAGGCGCCAATCTTGCATCACTTCTCAGAATCAATTGCTGGTTCTGCCACAATCCGTTGTTTCAATCAAGAGAAAATATTCCTAACCAAAGTTATGGATCTAATTGATGATTATTCTCGGGTAGCCTTTCACAATTATGCCACCATGGAATGGTTGTCAGTCCGAATCAATTTTCTCTTCAATCTGGTCTTCTATTTTGTTCTCGTCATCTTGGTCACTCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAATGTGCTTCAAGCTTGGGTGATATGGAATCTTTGCAATGTTGAGAACAAAATGATATCAGTTGAGAGAATATTACAATTCTCTAGCATACCAAGTGAAGCACCATTAATAATTGAAGCTTGTAGGCCTGAACCAGAGTGGCCCAGGGATGGAAAAATTGAGTTTCATAACCTTCATATACAGTATGATCCTGCTGCTCCTATGGTTCTCAAAGGTGTCACTTGCATCTTCCCAGGACAAAAGAAAATTGGAATAGTAGGTAGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCCCTATTTCGAGTGGTTGAGCCTTTGGAAGGATCGATACTTATTGATGGTGTACATATTTCCAAGATTGGTCTGCAAGATTTAAGATCTAAGCTTGGTATAATTCCCCAGGATCCAACCTTGTTTCTAGGTACTGTAAGGACAAACTTGGATCCTCTGGAACAACATTCAGATCAAGAACTTTGGGAGGTTCTCAGCAAGTGCCATCTTGCTGAAATAGTAAAGCAGGATCCAAGGCTTCTTGATGCACCAGTGGCTGAGAATGGAGAAAATTGGAGTGTTGGACAAAGACAGCTAGTTTGCCTTGCCAGGCTGCTACTGAAGAAAAGAAGAATTTTGGTTCTAGATGAGGCAACTGCATCCATTGACACTGCAACTGATAATTTAATTCAGAAGACTATCAGGGAAGAAACAAGTGGATGCACAGTCATTACAGTAGCTCATAGAATTCCTACAGTCATTGATAATGATTTGGTCTTGGTCCTTGATGAAGGGAGAATTGTGGAGTATGATCAACCTTCTCAACTGCTACAGAACAACTCTTCTTCATTCTCAAAGTTGGTGTCAGAATTTTTGAGGAGATCATCCCAAAAGGTGAAAGACGCTGTTGCTTCCTTGAGTGCCCAAAAGTCTATTACTAAGAAGAAGAGCAAACAACAAAGGCGGCAGAACAAATTGAAGGCATATAACCTCTCCTCACTCTTAGAGTCCCTTCCAGATTTGAAGGCATCACGGAAACTAGGTTGTGATGATGACTTCAAACTTAATTGTAAATCTAGGCAGAAATTAATATTGAAGGAAGGACAATGGTTGTCTGCTGTTCTTAAGGATCATTTCTTCCAAGCGGATCCCCTGTCTGCCATCCATCAACACATACAGCACACACAACCGGTAGTCGAGGAACAACCCAAGAAAAAAGTGAACAAAAATGGATCCAAGAAAAAGAAGAAATCAAAGGCTTCAACTGGATTACAGTCTATGGATATGTGA 4650 0.4043 MTILDALLGTANVAFFYVILIWILLHSLTQSKRNHVEYNSKHSPTFFAKITFLLSVVISVSNMALAFYEYTTQRIIGFNSVSLALTWVLATVVSFYSLKTTLKENKRFPFVLILWWIFASVVDVFLVSLVLVKNLESLNLWIFLLEDNVVDAVSLPMLLLLCFNALPNVSAREQSDMEQRLLQKELEFSREEGEGVFTNASMWSKLTFRWLNPIFNRGRIQKLELAHIPSVPHSETAESASFMLLESLRKQKLEGGSLTKAITHSIWKSLALNAILAGVNTIASYIGPLLISSFVNFLLENNSNNNSSIQYGLILAFIFFLSKTVESLSQRQWYFGAQRIGIQVRAALMALVYSKSLMMKCAGPTHGKVINLINVDVERIGDFCWYIHGVWLLPVQVILALVILYINLGSTPSFAALAVTILVMVCNTPLANMQENLHSKIMETKDSRIKVTSETMKNIRILKLHSWESTFLQKILQLRDTERSWLQKYLYTCSAVATLFWASPTLVSVVTFGACILVKTELTAAKVLSALATFRILQEPIYNLPELISMITQTKVSIDRIQEFIKEEDQNQFMNRHALETSSVAIEIKPGEYAWETNDHTHKKPTIQITKKLTIKKGQKVAICGSVGSGKSSLLYCMLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTDINMWSDGDLTLVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKIVEFGRYNDLIACPNSELVQQMAAHQETVNQINPCQEDDPVNCKSCHKSQIDAVEENIQETIMDWKRTREEEAMTGRVKWSVYSTFVTSAYKGALVPVILLCQILFQVMQMGSNYWISWATEEKDRVSKGQLMGTFILLSGGSSIFILGRTVLMATVSVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIMLMSQVAWQVILLFFAVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGSATIRCFNQEKIFLTKVMDLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSAIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIEACRPEPEWPRDGKIEFHNLHIQYDPAAPMVLKGVTCIFPGQKKIGIVGRTGSGKSTLVQALFRVVEPLEGSILIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHSDQELWEVLSKCHLAEIVKQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDLVLVLDEGRIVEYDQPSQLLQNNSSSFSKLVSEFLRRSSQKVKDAVASLSAQKSITKKKSKQQRRQNKLKAYNLSSLLESLPDLKASRKLGCDDDFKLNCKSRQKLILKEGQWLSAVLKDHFFQADPLSAIHQHIQHTQPVVEEQPKKKVNKNGSKKKKKSKASTGLQSMDM 1549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi442g00034 1549 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 670 1417 - -
Sebi442g00034 1549 Pfam ABC transporter 612 716 IPR003439 GO:0005524
Sebi442g00034 1549 SUPERFAMILY ABC transporter transmembrane region 862 1155 IPR036640 GO:0005524|GO:0016020
Sebi442g00034 1549 Gene3D ABC transporter type 1, transmembrane domain 826 1156 IPR036640 GO:0005524|GO:0016020
Sebi442g00034 1549 Gene3D ABC transporter type 1, transmembrane domain 258 571 IPR036640 GO:0005524|GO:0016020
Sebi442g00034 1549 Gene3D - 1158 1411 IPR027417 -
Sebi442g00034 1549 CDD ABC_6TM_ABCC_D1 272 561 IPR044746 GO:0140359
Sebi442g00034 1549 Pfam ABC transporter 1192 1340 IPR003439 GO:0005524
Sebi442g00034 1549 ProSitePatterns ABC transporters family signature. 689 703 IPR017871 GO:0005524|GO:0016887
Sebi442g00034 1549 SMART AAA_5 617 764 IPR003593 GO:0016887
Sebi442g00034 1549 SMART AAA_5 1201 1394 IPR003593 GO:0016887
Sebi442g00034 1549 Gene3D - 585 668 IPR027417 -
Sebi442g00034 1549 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 271 553 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi442g00034 1549 Gene3D - 669 807 IPR027417 -
Sebi442g00034 1549 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 862 1138 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi442g00034 1549 SUPERFAMILY ABC transporter transmembrane region 265 568 IPR036640 GO:0005524|GO:0016020
Sebi442g00034 1549 MobiDBLite consensus disorder prediction 1514 1549 - -
Sebi442g00034 1549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1168 1401 IPR027417 -
Sebi442g00034 1549 CDD ABCC_MRP_domain1 586 764 - -
Sebi442g00034 1549 CDD ABCC_MRP_domain2 1173 1393 - -
Sebi442g00034 1549 Pfam ABC transporter transmembrane region 864 1102 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi442g00034 1549 Pfam ABC transporter transmembrane region 272 540 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi442g00034 1549 FunFam ABC transporter C family member 3 1158 1410 - -
Sebi442g00034 1549 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1175 1409 IPR003439 GO:0005524
Sebi442g00034 1549 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 579 787 IPR003439 GO:0005524
Sebi442g00034 1549 CDD ABC_6TM_ABCC_D2 860 1150 IPR044726 GO:0140359
Sebi442g00034 1549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 777 IPR027417 -
Sebi442g00034 1549 FunFam ABC transporter C family member 10 254 569 - -
Sebi442g00034 1549 FunFam ABC transporter C family member 5 824 1156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi442g00034 Sebi-Chr442 683544 691250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi442g00034 579 795 Calmodulin-binding Proteins AT2G36910 25.000 3.09e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi442g00034 - - mtr:25501707 2288.46