Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi442g00030 ATGGAAATGGAATTAATATCTAGAGAATTTATCAAACCCTCTACACCTACACCTCCTCACCTTACAATCCACCCCTTATCTTTCATAGATCATATCGTAGCTCGCAATTATGTTCCAGTAATTTACTTTTACCCAAACGAGGCCTCTGAATATGACCACAATAACCAAGCTTCCAAATTATCAATGCTTAAGAATTCCCTATCCAAAGTTCTATCCATATACTACCCTTTTGCTGGTAGGTTCAGAGATCAAGTTTCAATTGATTGTAACGACCAAGGTGTCTCATTTCTTGTCACAAAAATCAAAACCAATCTCTCAAAGATTCTCCACAACCCCACCGAAACAGAGTTGAATCCTCTGTTCCCAGATGAAGTACAATGGAGGGTCATGGATTCAAGTGCAAGCATATTAGCCATTCAAATCAATTGTTTCACTTGTGGAGGAATAGCTATAAGTGTGTGTTTGTCACACAAAGTTGGTGATGGTCCCACACTTTTCAATTTCATCAATGATTGGGCCATCATGAACAGAAATTCCAATGAAGAAAAAACAGAGTTACTCTTCCCAGTTCTTGATGCAGGGGCATCACTATTCCTAGAAAAAAACTTTCCAATTTTCCCAGAATTTGTTTTTGTGAAACAAAATACTGTGTGTAGAAGGATTGTGTTTGAGGGGTCAAAAATTGAGTCCCTTAAGGCTATGGTATCATCCCATAAGGTTGAAAACCCTTCAAGAGTTGAAGTTGTCATTGCACTTATTTACAAGTGTGTGGTTTCTGCATTGAGATTGGCTAACAACACACCTTTGGTAGTTGCTGCTAATCTCCGTAGTAGAATGGTTCCTCCATTACCTGAAAAGTCCATAGGAAACTGGGTTTGGTCATTTCCTGTATTAAGGGAAAAAGCAGGGGAAACAGAGTTGCATGAGTTGGTGACCAAAATGAGAGAAGGGTTATCTGAGTTTTGTGACAAAAATGTGAAAAAATTTGGGGACTTTTCATTTGTATGTGAGTTCTTGAAAAATGCTACTTCTGTGAGAAAAAGAAAGGAAGATACTTTAAATGGTTCTGAGGACATTGCGAAGCCAAGTTTGTTTTACTTTGCTAGTTGGTGCAGGCTTCCAACTTATGAAGTGGATTTTGGGTGGGGTAAGCCAATATGGGTCACTAGTGTTTGCTCTCCAGTGAGGAATAGTGTGATTTTGATGGATACAAAAAATGGGAATGGGATTGAAGCACTTGTGAACATGGAAGAGCAAGACTTGGCCATACTTGAATGTGATGAGAAACTCCTTCAATATGCATCTCTTAATTAG 1314 0.3866 MEMELISREFIKPSTPTPPHLTIHPLSFIDHIVARNYVPVIYFYPNEASEYDHNNQASKLSMLKNSLSKVLSIYYPFAGRFRDQVSIDCNDQGVSFLVTKIKTNLSKILHNPTETELNPLFPDEVQWRVMDSSASILAIQINCFTCGGIAISVCLSHKVGDGPTLFNFINDWAIMNRNSNEEKTELLFPVLDAGASLFLEKNFPIFPEFVFVKQNTVCRRIVFEGSKIESLKAMVSSHKVENPSRVEVVIALIYKCVVSALRLANNTPLVVAANLRSRMVPPLPEKSIGNWVWSFPVLREKAGETELHELVTKMREGLSEFCDKNVKKFGDFSFVCEFLKNATSVRKRKEDTLNGSEDIAKPSLFYFASWCRLPTYEVDFGWGKPIWVTSVCSPVRNSVILMDTKNGNGIEALVNMEEQDLAILECDEKLLQYASLN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi442g00030 437 Gene3D - 213 433 IPR023213 -
Sebi442g00030 437 PANTHER F21J9.9 4 435 - -
Sebi442g00030 437 Pfam Transferase family 2 427 - -
Sebi442g00030 437 Gene3D - 1 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi442g00030 Sebi-Chr442 633687 635000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi442g00030 1 425 Monolignol Biosynthesis Gene Families AT5G48930 25.376 4.23e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi442g00030 - - gmx:100806928 507.294