Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi442g00029 ATGGAATTGATATCCAAAGAACTCATCAAACCCTCTACACCCACTCCTCACAAAATTCACACCCTCTCTTTCATAGATCATATCGTTGCTCCTAATTATGTGCCAGTAATTTACTTTTACCCAAACAAGGCATATGACCACCAAGGATCCAAAATTTCAAACCTCAAGAAATCCTTATCCAAAGTCCTATCCATATACTACCCTTTTGCTGGTAGGTTCAAAGATCAAGTTTCAATTGATTGCAACGACCAAGGTGTCTCATTCCTTGTCACAAGGATCAAAACCAACCTATCAGAGATCCTCCACAACCCCACCGAAACAGAGCTGAATCCTCTGTTCCCTGATGAATTGCCATGGAGGGACATGGAATCAAATGCAACCATAGTAGCAATTCAAATCAATTGTTTCAATTGTGGGGGAATGGCTATGAGTGTGTGTATGTCTCACAAAATGGGTGATGCTTCAACTCTTTTTAACTTCATCAATGACTGGGCCAGAATGAACCAAAACCCCAATGAAGAAAAAACAGAGTTACCCTTCTTTGATGCAGGGGATTCTCTGTTCCCACAAAGTGACCTTCCAGTTTTCCCACAAGTTCTGTTTGTGAAACAGAACACAATATGCAAAAGGTTTGTGTTTGAGGGGTCAAAGATTGAGTCCCTTAAGGCCATTGTAACATCTAAAAAAGTGGAAAACCCCACACGTGTTGAAGTTGTCATGGCACTGATTTACAAGCGTGTGGTTTCTGCTTTGGGATTGGATAACAACACACCTTTGAGAATTGCTGCAAATCTCCGCAGAAGAATGGTTCCTCCACTACCTGAAAAATCTGTTGGAAACTGGGTTTTGTCGTTTCCAGTGTCAGGGGAAAAAACAGGGGAAACAGAGTTGAATGAGTTGGTAACCAAAACAAGAGAAGGGTTATCTGAATTTTGTGACAAAACAGTGAAAAACTTTGGGGACTTTTCATTTGTATGTGAGTTTTTAAAAAAGGTTACTTCTTTACCAAAACCAAAGGAAGTTACTGCTTCAAATGATTGTAATAAAAACCAGCAGGTTATGAAGCAGAGTTTGATTTTCTTTGCTAGCTGGTGCAGGCTTCCAGCTTATGAAGTGGATTTTGGGTGGGGTAAGCCAATATGGGTCACTAGTATTGGGTCTCCTGTGAGGAATAGTGTGGTTTTGATGGATACAAAGAGTGGGAATGGGATTGAAGCACTTGTGAACATGGAAGAGCAAGACTTGGGTATATTTGAGTGTGATGTGGAACTCCTTCAATATGCTTCTCTTAATCCAAGTGTATGGTAG 1308 0.406 MELISKELIKPSTPTPHKIHTLSFIDHIVAPNYVPVIYFYPNKAYDHQGSKISNLKKSLSKVLSIYYPFAGRFKDQVSIDCNDQGVSFLVTRIKTNLSEILHNPTETELNPLFPDELPWRDMESNATIVAIQINCFNCGGMAMSVCMSHKMGDASTLFNFINDWARMNQNPNEEKTELPFFDAGDSLFPQSDLPVFPQVLFVKQNTICKRFVFEGSKIESLKAIVTSKKVENPTRVEVVMALIYKRVVSALGLDNNTPLRIAANLRRRMVPPLPEKSVGNWVLSFPVSGEKTGETELNELVTKTREGLSEFCDKTVKNFGDFSFVCEFLKKVTSLPKPKEVTASNDCNKNQQVMKQSLIFFASWCRLPAYEVDFGWGKPIWVTSIGSPVRNSVVLMDTKSGNGIEALVNMEEQDLGIFECDVELLQYASLNPSVW 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi442g00029 435 Gene3D - 1 195 IPR023213 -
Sebi442g00029 435 Gene3D - 203 429 IPR023213 -
Sebi442g00029 435 PANTHER F21J9.9 2 429 - -
Sebi442g00029 435 Pfam Transferase family 2 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi442g00029 Sebi-Chr442 627230 628537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi442g00029 8 419 Monolignol Biosynthesis Gene Families AT5G48930 25.571 4.54e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi442g00029 - - gmx:100806928 500.745