Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi442g00027 ATGGAACCAATGGAGCTGGAATTGATATCTAGGGAAACCATTAAACCCTCTACACCCACACCTCCTCACCTCAAAATTTACCCTCTCTCTTTCATAGATCACATCGTTTTCCGTAATTACATCCCTTCACTTTTCTTTTACAAGCCCCATGACCAAACATCCAAAATATTAATAGACCTCAAGAAATCATTATCTCAAGTTCTATCCCGATACTACCCTTTTGCAGGAAGGCTCAGGGACCAACTTTCCATAGAATGCAACGACCAAGGTGTCTCATTTCTGGTCGCAAGCATCAAAGGAATAAACCTATCAACAATCCTCCACAACCCAATCGAAGCATCACTGAACCCTTTGTTCCCTGATGAATTGCAATGGAAGGTCATGGATCCAAGTGAAAGCATAGTAGCCATTCAAATCAATTGTTTTCCATGCGGCGGAATAGCAATCAGTGTGTGTATGTGTCACAAAGTCGCAGACGCTGCCACGCTTTTCAACTTCGTCAATGATTGGGCCACAATTAACCGAAAAAAAGAAAAAGAATTATTAGTACTATTACCCTTCCCTTCACTTGATGGAGGAGTTTCATTGTTCCCACAAGAGGACTTGCCTATATACCCCGAAGCAGTGTTTGGGAAAGACAAAACGGTTTGTAGAAGGTTTGTTTTCCAAGCCTCGAAGATCGAGTCCCTCAAGGCCATAGTATCTTCCCACGCGCTGCAAAATCCCACGCGCGTTGAAGTTGTAACTGCCTGGATCTACAAGCGTGCGGTTTCTGCGTTGGGATTGACTTTCAAAACCACGTCGCTTCGGATTGCTGTTAACCTCCGGAAGAGAATGGTTCCTCCGTTGCCTGACACGTGTGTAGGGAACATGGTTTGGTTCTTTTTCGTGTTGAACCCGAGGGAAACCGAACTACATGAGTTGGTAAGCAAAATGAAAGAAGGGTTGTTGGAGTTTTGTGATGTGTTTGTGAAGAAATTTGGAGGGAATAATAAGGACATGTCATTCATCTCCGAGTGTTTGAAACAAGCTACTACTACTACTTCAGATTCGGAACCTTGTAAGGATGAGAAGGAGAAGCAAAGTTTGTTTATTTATGCGAGTTGGTGCAGGTTCCCAATGTATGAAGCGGATTTTGGGTGGGGGAAACCTATATGGGTGACAACTAGTGGGTTTCCAGTGAGGAATGGTATAGTTTTGATGGATACAAGAGATGGGAAAGGGATTGAAGCGGTTGTGAGTATGGAAGAGGAAGATATGGCTAGGTTTGAACGTGATGTGGAGCTTCTTCAATTTGCTTCTCTTAATCCGAACCGTGAGACATGTTAA 1329 0.4342 MEPMELELISRETIKPSTPTPPHLKIYPLSFIDHIVFRNYIPSLFFYKPHDQTSKILIDLKKSLSQVLSRYYPFAGRLRDQLSIECNDQGVSFLVASIKGINLSTILHNPIEASLNPLFPDELQWKVMDPSESIVAIQINCFPCGGIAISVCMCHKVADAATLFNFVNDWATINRKKEKELLVLLPFPSLDGGVSLFPQEDLPIYPEAVFGKDKTVCRRFVFQASKIESLKAIVSSHALQNPTRVEVVTAWIYKRAVSALGLTFKTTSLRIAVNLRKRMVPPLPDTCVGNMVWFFFVLNPRETELHELVSKMKEGLLEFCDVFVKKFGGNNKDMSFISECLKQATTTTSDSEPCKDEKEKQSLFIYASWCRFPMYEADFGWGKPIWVTTSGFPVRNGIVLMDTRDGKGIEAVVSMEEEDMARFERDVELLQFASLNPNRETC 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi442g00027 442 PANTHER F21J9.9 7 434 - -
Sebi442g00027 442 Gene3D - 212 433 IPR023213 -
Sebi442g00027 442 Pfam Transferase family 4 429 - -
Sebi442g00027 442 Gene3D - 3 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi442g00027 Sebi-Chr442 600770 602098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi442g00027 4 425 Monolignol Biosynthesis Gene Families AT5G48930 25.111 6.50e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi442g00027 - - gmx:100806928 619.387