Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi442g00023 ATGGGTTTATGTTCTCTCTTTCTGGTTATACTTCCTCTGTGGACATCATTTGCAATTTGCCAACTTGAAGAATTTGTTAGCATTGACTGTGGAGGGACAAGTAATTACACTGATAGAAACACTGGTTTGGCATGGATTTCAGATTCTGGGATCATGCAACATGGCACTCCAGTGGTAGTAGAAAGTCCAAATGGAAGCATGGTACAATATCAAAATCGTAGAGACTTTTCCATAGACAACAAGAAATATTGTTATACACTAAGCACAGAGGAGAGAAGAAGATACTTAGTGCGTGCAACATTTCAGTATGGAAGCTTGGAAAATGGAGACACATACCCTCAGTTTCAGCTATACTTGGATGCAACCAAATGGACTACTGTGTCAATATATGATGCCTCAAGAATATATGTTAAGGAAATGATCATCAGGGCACCCTCAAATTCTATTGATGTTTGCATGTGTTGTGCTACAACTGGTTCTCCTTTTATATCTACTCTTGAGTTAAGACCCTTGAATCTTTCAATGTATGCCACAGATTTTGAGGACAATTTCTTCTTAGAAGTAGCTGCAAGAATAAACTTTGGTGCTACTAGTGAGGATGCTGTCAGGTACCCAGATGATCCATATGATAGAATTTGGGAATCTGATCTTATTAGAAGGCAAAATTATCTTGTTGGTGTGGCCCCAGGCACTGAAAGAATTAGCACAACAAAGGACATAGAAATAGGGACAAGAGAATATCCACCTGTTAAAGTTATGCAAAATGCAGTTGTTGGCACAAAAGGAGTACTCAGTTACAGATTAAACCTTGAAGACTTCCCTGCTAATGCTAGAGCTTATGCATATTTTGCTGAGATTGAAGATCTGGGTAAGAATGAGACTAGAAAATTCAAATTACAACAACCTTATATACCTGACTATAGCAATGCAGTGGTTAACATTGCTGAGAATGCCAATGGGAGCTACATTCTATATGAACCAAGTTATATGAATGTGACTCTAGAATTTGTTCTGTCATTCTCTTTTGTTAAGACCCCAGATTCTACTAGAGGACCTCTTCTAAATGCATTGGAAATAAGCAAATATGTAAAGATTGCTTCAAAGACAGATAAGCAAGACTTAACTGTTGTAAATGCATTAGGATTCTTGTCTGCTGATAGTTTCCAAACAAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAATGGGTGAATTGTAGTACCACACCACCACCAAGAATTACAAAAATATTTCTTTCAAGAAGGAATTTGAAGGGTGAAATACCACCTGAGCTCAACAACATGGAAGCATTAACAGAGTTGTGGTTAGATGGAAACTTGCTTACAGGACCATTACCTGACATGAGCAATCTTATAAATCTAAAGATTGTGCATCTAGAGAACAACCAGTTGACTGGTCGACTACCATCTTACCTGGGTAGTTTGCCAAGCTTACAAGCTCTGTTCATACAGAATAACTCATTTAGTGGGGAAATACCAGCCAAATTAATATCTGGAAAAATCATTTTCAACTATGATGGTAATCCTGGACTATATAGAGGAAGCAAGAAGCATTTTAAGTTGATACTGGGAATTTCAATTGGAGTACTAGTGATTCTATTAATATTATTCTTAGGAAGTTTGGTGCTATTGCATAATATGAGAAGAAAGACATCTCATCAGAAACATGAGGAAAAAGGAATTTCTGGACGCACTAACAGTAAACCTTTAACTGCATACTCATCTGTTCGGGGTGGAAATATAATGGATGAAGGTACTACTTGCTATATCACACTCTCAGAGTTGAAAGAAGCTACTAACAATTTTTCAAAGCAAATTGGCAAAGGAAGCTTTGGATCTGTGTATTATGGGAAAATGGGAGATGGAAAGGAGGTGGCAGTTAAAAGTATGACTGATTCATCCAGTCATGGAAACCAACAATTTGTTAATGAGGCTAGATCATTAATTTGTAAAGGAGATGTGATGAGCATCATTGACCCTTCTCTAGCTGGGAATGTCAAAAGTGAATCCATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTAGCACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAAGGATCAGAAAATAAGCTAAAATCATCATCTTCAGGTAGTAGTAGTTGTTCAAAACCACATTCTTCCCGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACTTATCAAATGGTTGTCTCCCATCAGCAAGATAA 2286 0.378 MGLCSLFLVILPLWTSFAICQLEEFVSIDCGGTSNYTDRNTGLAWISDSGIMQHGTPVVVESPNGSMVQYQNRRDFSIDNKKYCYTLSTEERRRYLVRATFQYGSLENGDTYPQFQLYLDATKWTTVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGATSEDAVRYPDDPYDRIWESDLIRRQNYLVGVAPGTERISTTKDIEIGTREYPPVKVMQNAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKNETRKFKLQQPYIPDYSNAVVNIAENANGSYILYEPSYMNVTLEFVLSFSFVKTPDSTRGPLLNALEISKYVKIASKTDKQDLTVVNALGFLSADSFQTNEGDPCVPTPWEWVNCSTTPPPRITKIFLSRRNLKGEIPPELNNMEALTELWLDGNLLTGPLPDMSNLINLKIVHLENNQLTGRLPSYLGSLPSLQALFIQNNSFSGEIPAKLISGKIIFNYDGNPGLYRGSKKHFKLILGISIGVLVILLILFLGSLVLLHNMRRKTSHQKHEEKGISGRTNSKPLTAYSSVRGGNIMDEGTTCYITLSELKEATNNFSKQIGKGSFGSVYYGKMGDGKEVAVKSMTDSSSHGNQQFVNEARSLICKGDVMSIIDPSLAGNVKSESIWRVVEIAMQCVAQHGASRPRMQEIILAIQDAIKIEKGSENKLKSSSSGSSSCSKPHSSRKTLLTSFLEIESPDLSNGCLPSAR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi442g00023 761 SUPERFAMILY L domain-like 397 503 - -
Sebi442g00023 761 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 410 499 - -
Sebi442g00023 761 MobiDBLite consensus disorder prediction 719 735 - -
Sebi442g00023 761 Pfam Malectin-like domain 28 361 IPR024788 -
Sebi442g00023 761 PANTHER OS07G0107800 PROTEIN-RELATED 26 476 - -
Sebi442g00023 761 Gene3D Phosphorylase Kinase; domain 1 586 658 - -
Sebi442g00023 761 MobiDBLite consensus disorder prediction 716 735 - -
Sebi442g00023 761 Gene3D Ribonuclease Inhibitor 370 508 IPR032675 -
Sebi442g00023 761 SUPERFAMILY Protein kinase-like (PK-like) 593 654 IPR011009 -
Sebi442g00023 761 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi442g00023 Sebi-Chr442 565497 570854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi442g00023 547 761 Receptor kinase-like Gene Family AT1G67720 46.789 1.90e-31 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi442g00023 Malectin_like 6.2e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi442g00023 - - gmx:100790944 1110.9