Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi442g00016 ATGCCTAAGCAGATCCACGAGATTAAGGATTTTCTTCTGACGGCGAGGAGGAAGGATGCAAGGTCGGTGAAAATAAAGAGGAGCAGAGATGTGGTTAAGTTCAAGGTTCGTTGCTCCAAGTATTTGTACACTCTCTGTGTCTTTGACCCTGAGAAAGCTGATAAGTTGAAACAATCTCTTCCTCCTGGTTTGAGTGTTCAAGACCTCTAG 210 0.4429 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi442g00016 69 Gene3D - 1 69 IPR038464 -
Sebi442g00016 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Sebi442g00016 69 FunFam 60S ribosomal protein L38 1 69 - -
Sebi442g00016 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi442g00016 Sebi-Chr442 428914 429209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi442g00016 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 1.07e-43 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi442g00016 K02923 - pop:18106877 140.584