Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00063 ATGTCCTTTGTTTTCTCATCCCTTTCTTCCCTCATGCACCCTGCCACCGTTTTTCTCCTCAAACCCATTTTCCTTCATGGCCTATCTGCCCTCCTCCACCTACTGTTGGTGGTGGCAGTTTTAGTGTCATGGGTTTGGAAGAAAATCACGGCAGGTGCTAGGGATGACTCTAAGGAGAAATCCAGTGACACCCTTTTTACAGCGACTAAGTTTTGTTCTCTTGGTGTTTCTGCTTGCAATCTTGCTCTCTTCCTGTTTAATTACTTCTACTGGTATACAAGTGGTTGGTCTGAGGAAGAGCTCGTGACCCTTTTCGATTTGGCGCTCAAAACGGTTGCTTGGGGTGTTGTTTATGTTTGCTTGCTTAAGGGGTTCTTCAATTCAGGCGAAAGAAGAAGATTTCCATTCCTCTTCAGAACTTGGTGCGCTTTCTACCTCTTTGTTTCCTGTTATTCCTTCGTAGTTGACAATGTTATTCTCTATGAAAACCACGTTGCATTACCAACTCAGTACATAGTTTCTGATGTGGTATCTGCTTTGGCGGGTTTGTTCTTCTGCTACATGGGGTATTTTGTGAAAAATGAGGGTGAAGATGATAGCAGTAGTCTTCAAGAGCCTCTTTTGAATGGAGATACACGAGTCAAAGAGTCCAAAGGGAGTAACACTGTTACCCCTTTCTCAAATGCTGGAATTTTCAGCATTCTTACCTTCGCTTGGATGCGTCCTCTTATAGCTCTTGGCAATAAGAAGACCTTAGACCTTGAGGATGTCCCTCAACTGGACAGCAAAGACAGTGTAGTTGGAGCTTTTCCAACTTTCAGGGATAAACTTGAGGCTGATTGTGGTGCAATTAACCACGTGACCACACTTAAGCTGGTGAAGTTATTATTAATCTCAGCTTGGAAAGAGATTCTTTTCACAGCTTTTCTTTGTTTAATGAATACGTTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCCTTTGTTCAATACCTTGATGGACAACGGCTATACGAAAATCAGGGCTATGTTTTGGTCTCTGCATTTTTCTTTGCAAAGCTTGTTGAGTGTCTGTCACAAAGGCACTGGTTCTTTAGGTTGCAGCAAATTGGAATTCGAATCAGGTCACTACTTGTGACAATGATCTATAATAAAGCCTTGACAATTTCATGTCAATCAAAGCAGGGCCACACTTCTGGGGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGAGTGTTCAGTTGGTACTTGCATGATTTGTGGATGGTGGCTCTGCAAGTTACATTAGCCTTGTTGATTTTGTATAAAAACCTTGGGCTTGCTTCAATTGCTGCTTTTGTTACAACTGTCATTGTTATGTTGGCAAATATTCCCTTGGGATCATGGCAAGAGAAGTTTCAAAAGAAGCTGATGGAGTCAAAAGATACAAGAATGAAGACCACATCTGAGATTCTGAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAAATAACTGATCTCAGGAACACTGAGCAAGGCTGGATTGCATCTTTCCTTCGTCTTTATGACTTGCAGTCTGATGTTGTAGAAAAGCTTCCTCGGGATTGTTCTGATACAGCAATTGAAGTAATTGATGGGAATTTTTCTTGGAATTTATCTTCCCCTAATCCAACATTGCAAAACATAAATCTCAGAGTTTCTCATGGCATGAGGGTTGCTGTTTGTGGTACTGTTGGGTCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGTATCCTTAAGGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGCGGCAAGATAGAGGATAATATATTGTTTGGTAGAGACATGGATAGGGAAAGGTATGATAAGGTACTTGAAGCCTGTTCCCTGAAGAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACTGTTATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAAAAACAAAGAATACAAATTGCTCGTGCTCTTTACCAAGATGCTGATATATATCTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAATGCTTGTTGGGCCTTTTAAGTTCAAAGACAGTGGTTTATGTAACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATACTGGTCATGAAAGATGGAAAAATTACTCAATGTGGAAAGTATACTGATCTACTTAACACTGGGACTGATTTTATGGAACTTGTTGGTGCACACAAAAAAGCTTTGTCTACACTTGATTCATTGGATGGAGGGACAGTATCTGATGAAATAAGTACCTTGGAACAAGATGGAAATGTCTCTGGCACACACAGTGTTAAAGAAAAAGAGGCAAACAACAGCAATGGTAAAACAGATGACAATGATGAACCAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAGAAAGGTAGAGTTGGCTTTTCAGTCTATTGGAAGTATATCACAACAGCATATGGAGGAGCTCTTGTACCATTCATATTATTGGCTCAGATTCTTTTTCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCAATCTCACCAGATGCGGAACCACCTGTTGGAGGAACAACTCTTATAGAAGTCTATGTTGGTTTGGCCATTGGAAGTTCTTTCTGCATCCTAGCCAGAGCAATGTTTCTTGTCACAGCTGGTTATAAGACAGCTACTATACTCTTTAATAAAATGCACTATTGCATTTTCCGTGCCCCCATGTCATTTTTTGATTCCACTCCTAGTGGGCGAATCCTTAACAGAGCTTCTACTGACCAAAGTGCAGTGGACACGGACATTCCTTATTCAATTGGGTCATTTGCCTTCACCATGATCCAGCTTCTGGGAATTATAGCAGTGATGTCTCAGGTTGCTTGGCAGGTTTTCATTGTCTTCATTCCAGTGATAGCAATCAGTATCTGGTATCAGCAATATTATATACCATCAGCCCGAGAACTATCACGTTTAGTTGGAGTATGCAAAGCCCCAGTCATTCAACACTTTGCTGAAACTATTTCTGGAGCTTCAACCATTAGAAGCTTTGATCAGCAGTCAAGATTTCAGGAAACAAATATGAAACTGGCGGATGGGTATTCTCGGCCAAAATTCAATATTGCTGGTGCTATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTGCAATCACATTTGCCTTCTCCTTGATATTCTTGATATCTATTCCACAGGGAATCATAGATCCAGGCATTGCTGGTTTAGCTGTAACCTACGGGCTTAATTTAAACATGATACAAGCTTGGATGATATGGAGTCTTTGCAATTTGGAGAACAAAATTATATCAGTAGAAAGAATAGTTCAGTATACTTGCATTCCCAGTGAGCCTCCCCTTGTTGTAGATGAAAATCGGCCAGATCCTTCTTGGCCCTCATATGGCGAGATTGATATACAGGACATGCAGGTCCGTTATGCTCCACATCTTCCACTTGTGTTGCGTGGCATAACATGCACATTCCGGGGAGGACTAAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCAACTCTCATACAAACACTTTTCCGAATCATTGATCCTACTGTTGGGCGAATTATGATTGACAGCATCGACATTTCTTCTATTGGACTGCACGATTTGAGGTCTAGACTAAGCATCATTCCTCAGGATCCAACCATGTTTGAGGGGACAGTAAGAAATAATCTGGACCCCCTGGAAGAGTACACTGATGAACAAATTTGGGAGGCCTTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTAGACTCTGCAGTTACTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTGTGCCTTGGTAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCAGTTGATACAGCTACGGATAATTTAATTCAGCAAACTCTTAGGCAACATTTCTCTGATTCCACAGTCATTACAATTGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTTTGCTTCTTAATCAAGGACTTATTGAGGAGTATGACTCCCCAGCAACATTATTAGAAGATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACCATGAGGTCCAACTCCAGTTTTGAGAAATCTGATGATCACTGA 4269 0.4106 MSFVFSSLSSLMHPATVFLLKPIFLHGLSALLHLLLVVAVLVSWVWKKITAGARDDSKEKSSDTLFTATKFCSLGVSACNLALFLFNYFYWYTSGWSEEELVTLFDLALKTVAWGVVYVCLLKGFFNSGERRRFPFLFRTWCAFYLFVSCYSFVVDNVILYENHVALPTQYIVSDVVSALAGLFFCYMGYFVKNEGEDDSSSLQEPLLNGDTRVKESKGSNTVTPFSNAGIFSILTFAWMRPLIALGNKKTLDLEDVPQLDSKDSVVGAFPTFRDKLEADCGAINHVTTLKLVKLLLISAWKEILFTAFLCLMNTLASYVGPYLIDAFVQYLDGQRLYENQGYVLVSAFFFAKLVECLSQRHWFFRLQQIGIRIRSLLVTMIYNKALTISCQSKQGHTSGEIINFMTVDAERVGVFSWYLHDLWMVALQVTLALLILYKNLGLASIAAFVTTVIVMLANIPLGSWQEKFQKKLMESKDTRMKTTSEILRNMRILKLQGWEMKFLSKITDLRNTEQGWIASFLRLYDLQSDVVEKLPRDCSDTAIEVIDGNFSWNLSSPNPTLQNINLRVSHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGRDMDRERYDKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYTDLLNTGTDFMELVGAHKKALSTLDSLDGGTVSDEISTLEQDGNVSGTHSVKEKEANNSNGKTDDNDEPKGQLVQEEEREKGRVGFSVYWKYITTAYGGALVPFILLAQILFQVLQIGSNYWMAWATPISPDAEPPVGGTTLIEVYVGLAIGSSFCILARAMFLVTAGYKTATILFNKMHYCIFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPYSIGSFAFTMIQLLGIIAVMSQVAWQVFIVFIPVIAISIWYQQYYIPSARELSRLVGVCKAPVIQHFAETISGASTIRSFDQQSRFQETNMKLADGYSRPKFNIAGAMEWLCFRLDMLSAITFAFSLIFLISIPQGIIDPGIAGLAVTYGLNLNMIQAWMIWSLCNLENKIISVERIVQYTCIPSEPPLVVDENRPDPSWPSYGEIDIQDMQVRYAPHLPLVLRGITCTFRGGLKTGIVGRTGSGKSTLIQTLFRIIDPTVGRIMIDSIDISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLNQGLIEEYDSPATLLEDKSSSFAQLVAEYTMRSNSSFEKSDDH 1422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00063 1422 FunFam ABC transporter C family member 5 816 1153 - -
Sebi441g00063 1422 Pfam ABC transporter 562 696 IPR003439 GO:0005524
Sebi441g00063 1422 Pfam ABC transporter 1189 1337 IPR003439 GO:0005524
Sebi441g00063 1422 CDD ABC_6TM_ABCC_D2 853 1147 IPR044726 GO:0140359
Sebi441g00063 1422 SMART AAA_5 1198 1383 IPR003593 GO:0016887
Sebi441g00063 1422 SMART AAA_5 571 744 IPR003593 GO:0016887
Sebi441g00063 1422 MobiDBLite consensus disorder prediction 792 829 - -
Sebi441g00063 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1164 1402 IPR027417 -
Sebi441g00063 1422 CDD ABCC_MRP_domain1 544 744 - -
Sebi441g00063 1422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1174 1406 IPR003439 GO:0005524
Sebi441g00063 1422 ProSitePatterns ABC transporters family signature. 669 683 IPR017871 GO:0005524|GO:0016887
Sebi441g00063 1422 SUPERFAMILY ABC transporter transmembrane region 853 1154 IPR036640 GO:0005524|GO:0016020
Sebi441g00063 1422 Pfam ABC transporter transmembrane region 305 514 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi441g00063 1422 Pfam ABC transporter transmembrane region 855 1098 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi441g00063 1422 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 226 522 - -
Sebi441g00063 1422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 544 767 IPR003439 GO:0005524
Sebi441g00063 1422 Gene3D ABC transporter type 1, transmembrane domain 285 528 IPR036640 GO:0005524|GO:0016020
Sebi441g00063 1422 SUPERFAMILY ABC transporter transmembrane region 294 514 IPR036640 GO:0005524|GO:0016020
Sebi441g00063 1422 FunFam ABC transporter C family member 3 1155 1407 - -
Sebi441g00063 1422 CDD ABC_6TM_ABCC_D1 306 525 IPR044746 GO:0140359
Sebi441g00063 1422 Gene3D - 529 778 IPR027417 -
Sebi441g00063 1422 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 524 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi441g00063 1422 CDD ABCC_MRP_domain2 1170 1390 - -
Sebi441g00063 1422 Gene3D ABC transporter type 1, transmembrane domain 815 1153 IPR036640 GO:0005524|GO:0016020
Sebi441g00063 1422 MobiDBLite consensus disorder prediction 806 829 - -
Sebi441g00063 1422 FunFam ABC transporter C family member 5 529 776 - -
Sebi441g00063 1422 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 855 1135 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi441g00063 1422 FunFam ABC transporter C family member 10 288 540 - -
Sebi441g00063 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 766 IPR027417 -
Sebi441g00063 1422 Gene3D - 1155 1408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00063 Sebi-Chr441 733662 739389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi441g00063 544 774 Calmodulin-binding Proteins AT2G36910 29.880 4.86e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00063 - K05666 gmx:100777836 2251.86