Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00060 ATGCACCCTGCCACCGTTTTTCTCCTCAAACCCATTTTCCTTCATGGCCTATCTGCCCTCCTCCACCTACTGTTGGTGGTGGCGGTTCTAGTGTCATGGGTTTGGAACAAAATCACGGTGGGTGCTACGGATGACTCTAAGGAGAAATCCAGTGACACCCTTTTTTCAGTGACCAAGTTTTGTTCTCTAGGTGTTTCTGCTTGCAATCTTGCTCTCTTCCTGTTTAATTACTTCTACTGGTATACAAGTGGTTGGTCTGAAGAAGAGCTCGTGACCCTTTTCGATTTGGCGCTCAAAACGGTTGCTTGGGGTGTTGTTTATGTTTGCTTGCTTAAGGGGTTCTTCAATTCAGGTGAAAGAAGAAGATTTCCATTCCTCTTCATAACTTGGTGCGCTCTCTACCTCTTTGTTTCCTGTTATTCCTTCGTAGTGGACAATGTTATTCTCTATGAAAACCATGTTGCATTACCAACTCAGTACATAGTTTCTGATGTGGTATCTGCTTTGCCGGGCTTGTTCTTCTGCTATATGGGGTATTTTGTGAAAAATGAGGGTGGAGATGATAGCAGTAGTCTTCAAGAGCCTCTTTTGAATGGAGATACACAAGTCAAAGAGTCCAGGGGGAGTGACACTGTTACCCCTTTTTCAAATGCTGGAATTTTCAGCATTCTTACCTTCTCTTGGATGCGTCCTCTTATAGCTCTTGGCAATAAGAAGACCTTAGACCTTGAGGATGTCCCTCAACTGGACACCAAAGACAGTGTAGTTGGAGCTTTTCCAACTTTCAGGGATAAGCTTGAGGCTGATTGTGGTGCAATTAACCACGTGACCACACTTAAGCTGGTGAAGTTATTATTACTCACAGCTTGGAAACAGATTCTTTTCACAGCTTTTCTTGCTTTATTATACACGTTGGCTTGTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAATACCTTGATGGAAAACAGCTATATGAAAATCAGGGCTATGTTTTGGTCTCTGCATTTTTCTTTGCAAAGGTTGTCGAGTGTCTGTCACAAACGCACTTGTGCTTTAGGTTGCAGCAAGTTGGAATTAGAATCCGGTCACTGCTTGTGACCATGATCTATAATAAAGCCTTGACAATTTCATGCCAATCAAAGCAGGGCCACACTTCTGGGGAAATAATCAATTTTATGGCTGTTGATGCTGAAAGAGTTGGAGTGTTCAGTTGGTACTTGCATGATTTGTGGTTGGTGGCTCTGCAAGTTACATTAGCCTTGTTGATTTTGTATAAAAACCTTGGGCTTGCTTCAATTGCTGCTTTTGTTGCAACTGTCATTGTTATGTTGGCAAATATTCCCTTGGGATCATGGCAAGAGAAGTTTCAAAAGAAGTTGATGGGGTCAAAAGATAAGAGAATGAAGACCACGTCTGAGATTCTGAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAAATAACTGATCTCAGAAATATTGAGCAAGGCTGGTTAAGAAAATTTCTTTATACTTCAGCCATGACTACATTTGTATTTTGGGGTGCCCCCACATTTGTATCTGTGGTTACTTTTGGTACCTGTATAATTTTAGGGATCCCACTAGAATCGGGGAAGATCTTCTCAGCACTTGCAACATTCCGGATTCTTCAACAGCCCATTTATAAACTTCCAGATACAATTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTGCATCATTCCTTCGTCTTGATGACTTGCAGTCTGATGTTGTAGAAAAGCTTCCTCGGGATTGTTCTGATACAGCAATTGAAGTAATTGACGGGAATTTTTCTTGGAATTTATCTTCCCCTAACCCAACATTGCAAAACATAAATCTCAGAGTTTCTCATGGCATGAGGGTTGCTGTTTGTGATACTGTTGGGTCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGTATCCTTAAGGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGCGGCAAGATAGAGGATAATATATTGTTTGGTAGAGACATGGATATGGAAAGGTATGATAAGGTACTTGAAGCCTGTTCCCTGAAGAAGGATCTGGAGATTCTGTCATTTGGTGATCAGACGGTTATAGGAGAGCGTGGAATAAATTTGAGCGGTGGACAGAAACAAAGAGTACAAATTGCCCGTGCTCTTTACCAAGATGCTGATATATATCTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAATGCTTGCTGGGCCTTTTAAGTTCAAAGACTGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATACTGGTCATGAAAGATGGAAATATTACTCAATGTGGAAAGTATACTGATCTACTTAACACTGGGACTGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTACACTTGATTCATTGGATGGAGGGACAGTATCTGATGAAATAAGTACCTTGGAACAAGATGGGAATGTCTCTGGCATGCACAGTGTTAAAGAAAAAGAGGCAAACAAAGATGAGAATAATGGTAAAACAGATGACAAAGATGAACAAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAGAAAGGTAGAGTTGGCTTTTTAGTCTATTGGAAGTATATCACAATAGCATATGGAGGAGCTCTTGTACCATTCATATTATTGGCTCAGATTCTTTTTCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCAATCTCACCAGATGCGGAACCACCTGTTGGAGGAACAACTCTTATAGAAGTCTATGTTGGTTTGGCCATTGGAAGTTCTTTCTGCATCCTAGCCAGAGCAATGTTTCTTGTCACAGCTGGCTATAAGTCAGCTACTATACTCTTTAATAAAATGCACTACTGCATTTTCCGTGCCCCCATGTCATTTTTTGATTCCACTCCTAGTGGGCGAATCCTTAACAGAGCTTCTACTGACCAAAGTGCAGTGGACACAGACATTCCTTATTCAATAGGGTCATTTGCCTTCACCATAATCCAGCTTCTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTGTCTTCATTCCAGTGATAGCAATCAGCATCTGGTATCAGCAATATTATATACCATCAGCCCGAGAACTATCACGTTTAATTGGAGTGTGTAAAGCCCCAATCATTCAACACTTTGCTGAAACAATTTCTGGAGCTTCAACCATTAGAAGCTTTGATCAACAGTCAAGATTTCAGGAAACAAATATGAAACTGGCTGATGGGTATTCTCGACCAAAGTTCAATATAGCTGGTGCTTTGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTGCAATCACATTTGCCTTCTCCTTGATAATCTTGATATCTATTCCACAGGGAATGATAGATCCAGGCATTGCTGGTTTAGCTGTCACCTATGGACTTAATTTGAACACGATACAAGTTTCGTTGATATGGAGTCTTTGCAAATTAGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTGCATTCCTAGTGAGCCTCCCCTTGTTGTAGACGAAAATCGGCCAGATCCTTCTTGGCCCTCATATGGCGAGATAGATATACAGGACATGCAGGTTCGTTATGCTCCACATCTTCCACTTGTGTTGCGTGGCATAACATGCAAATTCCGGGGAGGACTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCAACCCTCATACAAACACTTTTCCGAATCATTGATCCTACTGTTGGGCGAATTATGATTGACAGCATCGACATTTCTTCAATTGGACTGCATGATTTGAGGTCTAGACTAAGTATCATTCCTCAGGATCCAACCATGTTTGAGGGGACAGCCTTGGATAAATGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTAGACTCTGCAGTTACTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTGTGCCTTGGTAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCAGTTGATACAGCTACAGATAATTTAATTCAGCAAACTCTTAGGCAACATTTCTCTGATTCCACAGTCATTACAATTGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTTTGCTTCTTAATCAAGGACTTATTGAGGAGTATGACTCCCCAACAACATTGTTAGAAGATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACCATGAGGTCCAACTCCAGTTTTGAGAAATCTGTTGATCACTGA 4413 0.4083 MHPATVFLLKPIFLHGLSALLHLLLVVAVLVSWVWNKITVGATDDSKEKSSDTLFSVTKFCSLGVSACNLALFLFNYFYWYTSGWSEEELVTLFDLALKTVAWGVVYVCLLKGFFNSGERRRFPFLFITWCALYLFVSCYSFVVDNVILYENHVALPTQYIVSDVVSALPGLFFCYMGYFVKNEGGDDSSSLQEPLLNGDTQVKESRGSDTVTPFSNAGIFSILTFSWMRPLIALGNKKTLDLEDVPQLDTKDSVVGAFPTFRDKLEADCGAINHVTTLKLVKLLLLTAWKQILFTAFLALLYTLACYVGPYLIDAFVQYLDGKQLYENQGYVLVSAFFFAKVVECLSQTHLCFRLQQVGIRIRSLLVTMIYNKALTISCQSKQGHTSGEIINFMAVDAERVGVFSWYLHDLWLVALQVTLALLILYKNLGLASIAAFVATVIVMLANIPLGSWQEKFQKKLMGSKDKRMKTTSEILRNMRILKLQGWEMKFLSKITDLRNIEQGWLRKFLYTSAMTTFVFWGAPTFVSVVTFGTCIILGIPLESGKIFSALATFRILQQPIYKLPDTISMIAQTKVSLDRIASFLRLDDLQSDVVEKLPRDCSDTAIEVIDGNFSWNLSSPNPTLQNINLRVSHGMRVAVCDTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGRDMDMERYDKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGNITQCGKYTDLLNTGTDFMELVGAHKKALSTLDSLDGGTVSDEISTLEQDGNVSGMHSVKEKEANKDENNGKTDDKDEQKGQLVQEEEREKGRVGFLVYWKYITIAYGGALVPFILLAQILFQVLQIGSNYWMAWATPISPDAEPPVGGTTLIEVYVGLAIGSSFCILARAMFLVTAGYKSATILFNKMHYCIFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPYSIGSFAFTIIQLLGIIAVMSQVAWQVFIVFIPVIAISIWYQQYYIPSARELSRLIGVCKAPIIQHFAETISGASTIRSFDQQSRFQETNMKLADGYSRPKFNIAGALEWLCFRLDMLSAITFAFSLIILISIPQGMIDPGIAGLAVTYGLNLNTIQVSLIWSLCKLENKIISVERILQYTCIPSEPPLVVDENRPDPSWPSYGEIDIQDMQVRYAPHLPLVLRGITCKFRGGLKTGIVGRTGSGKSTLIQTLFRIIDPTVGRIMIDSIDISSIGLHDLRSRLSIIPQDPTMFEGTALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLNQGLIEEYDSPTTLLEDKSSSFAQLVAEYTMRSNSSFEKSVDH 1470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00060 1470 SMART AAA_5 635 808 IPR003593 GO:0016887
Sebi441g00060 1470 SMART AAA_5 1264 1431 IPR003593 GO:0016887
Sebi441g00060 1470 MobiDBLite consensus disorder prediction 862 893 - -
Sebi441g00060 1470 CDD ABCC_MRP_domain1 608 807 - -
Sebi441g00060 1470 SUPERFAMILY ABC transporter transmembrane region 919 1220 IPR036640 GO:0005524|GO:0016020
Sebi441g00060 1470 ProSitePatterns ABC transporters family signature. 733 747 IPR017871 GO:0005524|GO:0016887
Sebi441g00060 1470 Pfam ABC transporter 626 760 IPR003439 GO:0005524
Sebi441g00060 1470 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 215 1457 - -
Sebi441g00060 1470 SUPERFAMILY ABC transporter transmembrane region 287 587 IPR036640 GO:0005524|GO:0016020
Sebi441g00060 1470 FunFam ABC transporter C family member 10 277 590 - -
Sebi441g00060 1470 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1454 IPR003439 GO:0005524
Sebi441g00060 1470 FunFam ABC transporter C family member 5 593 840 - -
Sebi441g00060 1470 CDD ABCC_MRP_domain2 1236 1438 - -
Sebi441g00060 1470 FunFam Multidrug resistance-associated protein member 4 1222 1456 - -
Sebi441g00060 1470 Pfam ABC transporter 1255 1385 IPR003439 GO:0005524
Sebi441g00060 1470 FunFam ABC transporter C family member 5 882 1219 - -
Sebi441g00060 1470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 830 IPR027417 -
Sebi441g00060 1470 Gene3D ABC transporter type 1, transmembrane domain 880 1219 IPR036640 GO:0005524|GO:0016020
Sebi441g00060 1470 Gene3D ABC transporter type 1, transmembrane domain 274 589 IPR036640 GO:0005524|GO:0016020
Sebi441g00060 1470 MobiDBLite consensus disorder prediction 858 893 - -
Sebi441g00060 1470 CDD ABC_6TM_ABCC_D2 919 1213 IPR044726 GO:0140359
Sebi441g00060 1470 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 921 1201 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi441g00060 1470 CDD ABC_6TM_ABCC_D1 295 582 IPR044746 GO:0140359
Sebi441g00060 1470 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 294 574 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi441g00060 1470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1230 1450 IPR027417 -
Sebi441g00060 1470 Gene3D - 1221 1456 IPR027417 -
Sebi441g00060 1470 Pfam ABC transporter transmembrane region 294 561 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi441g00060 1470 Pfam ABC transporter transmembrane region 921 1162 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi441g00060 1470 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 608 831 IPR003439 GO:0005524
Sebi441g00060 1470 Gene3D - 590 842 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00060 Sebi-Chr441 695309 701043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi441g00060 608 838 Calmodulin-binding Proteins AT2G36910 29.084 6.94e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00060 - K05666 gmx:100777836 2420.58