Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00054 ATGGCTACCATTTTCTCTCTATACCCTTACAATCCCATGCTCTATGTTCTAACTCCTTCTTCTCCCACTTCTGCTTCTTCCTTTTGGAGCTTTGGGAAACGGAGCAAGTTGGCGGTGCTTGCAGCGCATTCCAATCCGAGGATTGTTAAGACCAACAGAAAGTCAAGGAGGAGTTTGCTGAGCCAACTGACTCTGATGTTAACAAGAGATTTAAGTCACGGACAGTTAAAGAAAAAGATAGACAACAGGAAAAGGAGTGGGGTGGGAGGTCTTTTAACAATGGACAAAGCACTAGAATGCCCAAAAGTGAGGAAGTGGCATCCTTACGACAAAATGATAGTGGAAAGTGTTGAGAATTCATTAAAACCAACAGTAAGATATTTAGTTGAGGAAGTTGGTATCAAGGAAAAGGATTTGGGTAAAGTCATTCAGCTGAGTCCCCAAATTCTTGTCCAGCGTATTGACATTTCATGGAATACGCGATATATGTTTCTTACCAAAGAGTTGGGTGCACCGAAAGATAGCGTTGTGAAGATGGTGACTAAACATCCCCAGCTTCTCCATTACAGCATAGATGACGGATTACTACCAAGAATAAATTTCTTAAGGAGCATAGGAATGAAAAATTCAGACATCTTGAAAGTCTTGACTAGCCTTACACAGGTGCTATCTTTGTCCTTGGAGGAGAATCTAAAGCCCAAGTATTTGTACTTGGTAAATGAACTTAACAATGAGGTGCAATCCTTGACCAAATACCCAATGTATCTTAGCTTGTCTTTGGACCAGAGAATTCGTCCTCGTCATAGGTTCTTGGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCTCTTGGATCCCTAGTTCCAACTGATGAATGCTTTTGTCAACAGTGGGCTGGAACTAGTTTGGATAAATATTTGGCATTTCGTCAAAAATTATTACTCAAAAAGTTTGCTGAGAAATATGAAAGAAAAATGTGA 981 0.4027 MATIFSLYPYNPMLYVLTPSSPTSASSFWSFGKRSKLAVLAAHSNPRIVKTNRKSRRSLLSQLTLMLTRDLSHGQLKKKIDNRKRSGVGGLLTMDKALECPKVRKWHPYDKMIVESVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRYMFLTKELGAPKDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQKLLLKKFAEKYERKM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00054 326 Gene3D Transcription termination factor 3, mitochondrial 99 313 IPR038538 -
Sebi441g00054 326 FunFam Transcription termination factor MTERF9, chloroplastic 107 313 - -
Sebi441g00054 326 SMART mt_12 110 135 IPR003690 GO:0003690|GO:0006355
Sebi441g00054 326 SMART mt_12 213 245 IPR003690 GO:0003690|GO:0006355
Sebi441g00054 326 SMART mt_12 140 172 IPR003690 GO:0003690|GO:0006355
Sebi441g00054 326 SMART mt_12 246 277 IPR003690 GO:0003690|GO:0006355
Sebi441g00054 326 SMART mt_12 177 208 IPR003690 GO:0003690|GO:0006355
Sebi441g00054 326 PANTHER CGI-12 PROTEIN-RELATED 57 220 IPR003690 GO:0003690|GO:0006355
Sebi441g00054 326 Pfam mTERF 120 274 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi441g00054 mTERF 1.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00054 K15031 - gmx:100809638 403.29