Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00049 ATGGCAGAAGAAGAATATTTAACATTTGACAAGAACAATGGTGATAAGTTCGGGAAGAAAAATATTGATGAGATGCATGCAACGATTCCTATTGAATTTATACCAAAAGTTGGGATGGAGTTTGACATAGAAGAGGCAGCCTATACCTTTTACAATTCTTATGCCTATAAAGTGGGGTTTAGTATAAGGAATAGTAAAGGACATAAAGATGGTAGTGGTAAGATAGTCGATAAAGTGTTCTGTTGTTCATGTGAAGGTTATCGCGGGAAAGATAAACGAGAGGCTAATACCAAGAATCCTCGTGCACAAACAAGATTTGGTTGCTTGGCTAAGATGAAATATGAGGAAGAAGAAGAGTTTCTTGTAGCCTGGAATAATATGCTTGAGAAGTATGATCTTCAAGATAACAGTTGGTTGAAGCAAACATTTGCTTTGAAAGAAAAATGGGCATTAGTTTATGGTCGGGCAAACTTTTGTGCTGATATGACAACTATACAACGCATTCATGAGGACCCCAAGGAAAGAAGAGCAGAGCGTTACCAAGACTTATGTAGGAGGAAAGTTGAGCTAGAAACTAAAGGTAGAGGCGGGGAAGTTGATGCCCAAGGCGTTTCATCTATTAATACCGAAAATGCTTTTACTAGTGGGAATAATAAAAGTGTAAAGGGGTTAAAGACAAAAGAAAGATTTTGTGGAACATCTACTAGGCCCAAAGGTGTTCTTGAAAGAAGAAGGAAAAAAAAGAAAGTTGTAGAACCTGATGAACCTTCATCGCAAAACTTGGATTGTGAATTACCCTCATTCCAGTCTAGTCAGTTGCCCACCAATGTTGCATGCAATATCTCCGAAGGGCCAACTAGCAACATGAGCATGATGGAATTACTACAGGCACAGTTATCTGGCTTTGAACATGGACATCAAGGAAATGATGGTAGTAATTCTCAAAGCCAAGATCAATAA 960 0.3833 MAEEEYLTFDKNNGDKFGKKNIDEMHATIPIEFIPKVGMEFDIEEAAYTFYNSYAYKVGFSIRNSKGHKDGSGKIVDKVFCCSCEGYRGKDKREANTKNPRAQTRFGCLAKMKYEEEEEFLVAWNNMLEKYDLQDNSWLKQTFALKEKWALVYGRANFCADMTTIQRIHEDPKERRAERYQDLCRRKVELETKGRGGEVDAQGVSSINTENAFTSGNNKSVKGLKTKERFCGTSTRPKGVLERRRKKKKVVEPDEPSSQNLDCELPSFQSSQLPTNVACNISEGPTSNMSMMELLQAQLSGFEHGHQGNDGSNSQSQDQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00049 319 MobiDBLite consensus disorder prediction 297 319 - -
Sebi441g00049 319 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 113 IPR031052 GO:0006355
Sebi441g00049 319 MobiDBLite consensus disorder prediction 302 319 - -
Sebi441g00049 319 Pfam FAR1 DNA-binding domain 49 118 IPR004330 -
Sebi441g00049 319 MobiDBLite consensus disorder prediction 232 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00049 Sebi-Chr441 555747 558285 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi441g00049 FAR1 2.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00049 - K17604 ccaj:109817905 167.933