Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00038 ATGCCAGACCAATACCTTAAAGAACCTCGTCTTGTAGCCAGGAAGTTCTTAGCCAAACCTCAACATGAAGGTGTTGGGGCAGTTGTTAGAAGAAGCATAGGAAGATTTGAGCTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTTGCTGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGCTTTGAGACAGTCACATACATGTTGCAGGGAGCTGTAACGCATGAAGACTTTGAAGGACATAAGGGAACTATTGAAGCTGGTGACTTGCAGTGGATGACTGCAGGGAGAGGAATTGTTCACTCAGAAATGCCTGCTTCTCAAGGAACCCAAAAGGGTCTTCAGCTGTGGATCAACCTTGCTTCACAACATAAAATGATTGAACCAAGGTATCAAGAAATGTTGAGCAAGGACATAGCAGAAGCTATGAGGGATGGTATCAAGGTTAGAGTTATAGCAGGGGAAGCACTTGGGATAAAATCTCCAATCTACACAAGGACTCCAACCATGTACTTGGACTTTTCTCTAAAACCAGGGGCACACTTACAACAATTTATACCAAAATCATGGAATGCTTTTGTGTACATCTTGGAAGGAGAGGGAGTGTTTGGAAACCAAAAATCTCAACCTACAACACCTCACCATATTCTTCTTCTTGGTCCTGGGGATGGACTAGAGGCATGGAACAAATCTTCTAAGCTACTTAGGTTCATTTTGGTTGGAGGGGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCCTTTGTGATGAATACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTATGCCAATGGATTTGAGAAAGCAAGACACTGGAGGTCTGAGAGTGCAATTAGTCTTGATTTTTAA 894 0.4284 MPDQYLKEPRLVARKFLAKPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVAAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPASQGTQKGLQLWINLASQHKMIEPRYQEMLSKDIAEAMRDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQFIPKSWNAFVYILEGEGVFGNQKSQPTTPHHILLLGPGDGLEAWNKSSKLLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYANGFEKARHWRSESAISLDF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00038 297 CDD cupin_pirin_C 172 248 - -
Sebi441g00038 297 Pfam Pirin 29 122 IPR003829 -
Sebi441g00038 297 FunFam pirin 23 161 - -
Sebi441g00038 297 CDD cupin_pirin_N 27 124 - -
Sebi441g00038 297 Gene3D Jelly Rolls 144 249 IPR014710 -
Sebi441g00038 297 Gene3D Jelly Rolls 23 275 IPR014710 -
Sebi441g00038 297 PANTHER PIRIN-RELATED 7 291 IPR012093 -
Sebi441g00038 297 PIRSF Pirin 8 288 IPR012093 -
Sebi441g00038 297 SUPERFAMILY RmlC-like cupins 10 289 IPR011051 -
Sebi441g00038 297 Pfam Pirin C-terminal cupin domain 175 278 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00038 Sebi-Chr441 419863 422656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi441g00038 9 285 Calmodulin-binding Proteins AT3G59220 60.215 4.25e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00038 K06911 - gmx:100790637 575.474