Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00023 ATGATTTTAGAAGGAGAAGATAGTGAGAGCACGATCATTACTTACGGTGATCACCAAGCAACAAACTCAAGCGCTACATTCATTTCATTTCCACCTAATGTGATTAACTCGTTTAATGTAGCAAAATGGTCGAGAATGCATATTAATAGGGCAGGTGAAATCAAACCAGCCGTGGCAGCAAGACGCCATTACTTTAAAGATTGCTACATTGAAGGCGAAGTGGACTTTATTTTTGGTGATGCCCAATCTTATTATGAGAATTGTTTGATCAACGCCACACAATTGGAAAATAAACCTTCAGGTTTTATCACAGCCCAAAATCGAAATTCAACAAAGGATCCAGGTGGTTTTGTTTTTGCTGGAGGTTCAGTTGTTGGGTTTGGTGAAGTGAATTTAGGAAGAGCATGGGGTCCTTATTCAAGAGTTATATTTCAAAATACATATCTTTCTGGAGTGGTAACCCCTCAAGGATGGAATGCTTGGGACTATGCAGGGTACGAGAGAAATTTCATGTATGTAGAATTCAATTGCACGGGAGCTGGGAGTGATACCTCAATGCGTCCCCCTTGGGTGAAGACGGAGTTGAGTCAAAAAGAGCTAAATGAATATTCTTTATCATCTTTCATTAATCAAGATCATTGGCTCGACAAAATACCAACTATATGA 666 0.3934 MILEGEDSESTIITYGDHQATNSSATFISFPPNVINSFNVAKWSRMHINRAGEIKPAVAARRHYFKDCYIEGEVDFIFGDAQSYYENCLINATQLENKPSGFITAQNRNSTKDPGGFVFAGGSVVGFGEVNLGRAWGPYSRVIFQNTYLSGVVTPQGWNAWDYAGYERNFMYVEFNCTGAGSDTSMRPPWVKTELSQKELNEYSLSSFINQDHWLDKIPTI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00023 221 Pfam Pectinesterase 59 211 IPR000070 GO:0030599|GO:0042545
Sebi441g00023 221 Gene3D - 46 220 IPR012334 -
Sebi441g00023 221 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 61 216 - -
Sebi441g00023 221 SUPERFAMILY Pectin lyase-like 3 218 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00023 Sebi-Chr441 202596 203920 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi441g00023 3 167 Carbohydrate Esterase AT2G19150 41.000 9.76e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00023 - - gmx:100787453 246.514