Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00021 ATGGATTGTGGCGGGAAACAAGTTGCAAAAACCATCACTGTTGATCAGCATGGCAAAGGAGATTTCAAGACAATTCAAGCTGCCATTGATTCTATAAAGAGCCAAAATGATCAATGGATTAAGATTCATATAAACTCTGGCACATACAAAGAAAAGGTTTCTATTCCTATAGAAAAACCATGCATCATTTTGGAAGGAGCTGGTAGGCAGAACACAATCATTACTTATGGTGATCACCAATCAATAGCAAATAGCGCTACATTCACTTCATCTCCACCTAATGTGGTTGTAAGTGGCATCACCTTTAAGAACTCGTTCAATTTGGCACGATGGTCGAAATTGTATAAATACAAAAATGGAATTGAACCAGCAGTGGCAGCTAGTGTATCTGGAGACAAATCTGCCTTCTTTAGTTGTAGTTTCATGGGTTATCAAGACACCTTGCTTGATTCAGAGGGACGCCATTATTTTAAAGGTTGCTACATACAAGGTGAAGTGGACTTTATTTTTGGTTCCGGTCAATCATATTATGAGAATTGCGCGATCAATGCCACACAAGGGAATTCTTTACCCTCGGGTTTTGTTACAGCCCAAGGTAGGAATTCATCAAATGACCCAAATGGTTTTGTTTTTTATGGAGGTTCCATTGATGGGAATGGTAAAGTGAATCTAGGAAGAGCATGGGGCCCTTACTCAAGAGTTATATTTCATAGAACAACTTTTTCTTCAGTGGTAACCTTAGAAGGATGGAATGCTTGGAGCTTCATAGGCCACGAGAGTAACTTCATCTATGCAGAAGTTAATTGTACAGGAGAAGGGAGCAATACTTCAAAGCGTCCCCCTTGGGTGAAGAAGGAATTGAGTCCATCAGAGCTAAATAAATATTCTTTATCATCTTTCATCAACAAAGATAATTGGATTGCCAACATACCAACGCTCTTCTTGTAA 948 0.3914 MDCGGKQVAKTITVDQHGKGDFKTIQAAIDSIKSQNDQWIKIHINSGTYKEKVSIPIEKPCIILEGAGRQNTIITYGDHQSIANSATFTSSPPNVVVSGITFKNSFNLARWSKLYKYKNGIEPAVAASVSGDKSAFFSCSFMGYQDTLLDSEGRHYFKGCYIQGEVDFIFGSGQSYYENCAINATQGNSLPSGFVTAQGRNSSNDPNGFVFYGGSIDGNGKVNLGRAWGPYSRVIFHRTTFSSVVTLEGWNAWSFIGHESNFIYAEVNCTGEGSNTSKRPPWVKKELSPSELNKYSLSSFINKDNWIANIPTLFL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00021 315 Gene3D - 5 313 IPR012334 -
Sebi441g00021 315 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 308 - -
Sebi441g00021 315 SUPERFAMILY Pectin lyase-like 8 311 IPR011050 -
Sebi441g00021 315 FunFam Pectinesterase 6 311 - -
Sebi441g00021 315 Pfam Pectinesterase 12 303 IPR000070 GO:0030599|GO:0042545
Sebi441g00021 315 Coils Coil 315 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00021 Sebi-Chr441 183429 185335 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi441g00021 2 259 Carbohydrate Esterase AT2G19150 49.808 1.08e-79 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00021 - - var:108336510 394.815