Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00019 ATGGATTGTGGTGGGAAGCAGGTTCCAAATACCATCATTGTTGATCAACATGGCAAAGGAGAATTCAACACGATTCAAGCTGCCATTGATTCTATAAAGAGCCCAAATGATCAATGGATTAAGATTCAAGTAAACCCCGGCACATATGTGGAAAAGGTTTCTATTCCCAAAGGGAAGCCATGCATCATTTTGGAAGGAGATAATAGGCAGAACACAATCATTACTCACGGTGATCATCAATCAATATCAAACTTCAGTGCTACATTTAGTTCATCCCCACCTAATGTGGTTGTAAGTGGCATTACTTTTAAGAACTCATTTAATCTGGCACAATGGTTGAAAAAGTATAAGCACACAAATTATGGAATTGAAATAGCAGTGGCAGCTAGTGTATCTGGAGACAAATCTGCCTTCTTCAGTTGTAGTTTCATGGGTTATCAAGACACCCTGCGAGATTCAATTGGACGCCATTACTTTAAAGATTGCTACATTCAAGGTTCCATTGATGGGAATGGTAAAGTGGATCTAGGAAGAGCATGGGGTCCTTACTCAAGAGTTATATTTCATAGAACAATCTTTTCTTCAGTGGTAACCCCTAAAGGATGGAATGCTTGGAGCTTCACAGGCAACGAGAGTAACTTCATTTATGCTGAAGTTAATTGCACTGGAAAAGGGAGCAATACTTCAGAGCGTCCCCCTTGGGTAAAGAAGGAAATGAGTCCATCAGAGCTCAATGAATATTCTTTATCATCTTTCATCAACAAAGATGGTTGGCTTGCCAACATACCAACTATGTTCTTGTAA 804 0.3955 MDCGGKQVPNTIIVDQHGKGEFNTIQAAIDSIKSPNDQWIKIQVNPGTYVEKVSIPKGKPCIILEGDNRQNTIITHGDHQSISNFSATFSSSPPNVVVSGITFKNSFNLAQWLKKYKHTNYGIEIAVAASVSGDKSAFFSCSFMGYQDTLRDSIGRHYFKDCYIQGSIDGNGKVDLGRAWGPYSRVIFHRTIFSSVVTPKGWNAWSFTGNESNFIYAEVNCTGKGSNTSERPPWVKKEMSPSELNEYSLSSFINKDGWLANIPTMFL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00019 267 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 172 260 - -
Sebi441g00019 267 Pfam Pectinesterase 12 169 IPR000070 GO:0030599|GO:0042545
Sebi441g00019 267 Pfam Pectinesterase 176 255 IPR000070 GO:0030599|GO:0042545
Sebi441g00019 267 SUPERFAMILY Pectin lyase-like 8 263 IPR011050 -
Sebi441g00019 267 Gene3D - 171 266 IPR012334 -
Sebi441g00019 267 Gene3D - 5 170 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00019 Sebi-Chr441 167623 170316 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi441g00019 2 211 Carbohydrate Esterase AT2G19150 39.163 1.85e-53 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00019 - - tpra:123922273 299.286