Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00013 ATGAGGAAGGGCAACAGAGGAGGAGCCACGGCGGCGATGGCGATGGATGTTAACGGATCCGGGTCGAGGACAATATTAAAAGAGCCTCGTTACCGTGGCGTGAGGAAGAGACCATGGGGGAGGTTCGCGGCGGAGATCAGAGACCCGATTAAGAAAGCGAGGGTTTGGCTTGGAACCTTCGATTCTGCAGAGGAAGCTGCTAGAGCCTATGACGCCGCCGCACGCACCCTCCGTGGACCCAAAGCAAAGACCAATTTCCCTCTCTCACCTTTCTGCTATCACCACCAACACCCCACCGTTGATCCCTTCTTCTACGCCGCCGGTAACGGTTTCCAAGACCACCACCACCACATGAACAACCCACAGAGACCAACCTCTAGTGGCATGAGCAGCACGCCGCCGTCCTTCAGTGGGCCCCGCCCTCCCTCCGCCGTCAACCCCTCTCCGCCGGCCGCCACTCGCCGGTATCCCAGGACACCGCCGGTTGTCCCTGAAGATTGCCACAGTGATTGCGATTCCTCTTCCTCCGTCGTAGACGACGGAGACGATAACATCGTTTCGTCGTCGTTTCGAACGCCGTTGCCGTTTGATCTAAACGCACCGCCGTTTGATGTTGGTGCTGACGTGGCCACCGGTGATGATGAACTTCGCTGCACTGCGCTATGTCTCTGA 672 0.5833 MRKGNRGGATAAMAMDVNGSGSRTILKEPRYRGVRKRPWGRFAAEIRDPIKKARVWLGTFDSAEEAARAYDAAARTLRGPKAKTNFPLSPFCYHHQHPTVDPFFYAAGNGFQDHHHHMNNPQRPTSSGMSSTPPSFSGPRPPSAVNPSPPAATRRYPRTPPVVPEDCHSDCDSSSSVVDDGDDNIVSSSFRTPLPFDLNAPPFDVGADVATGDDELRCTALCL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00013 223 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 184 - -
Sebi441g00013 223 FunFam Ethylene-responsive transcription factor 2 30 88 - -
Sebi441g00013 223 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Sebi441g00013 223 MobiDBLite consensus disorder prediction 135 157 - -
Sebi441g00013 223 CDD AP2 29 89 IPR001471 GO:0003700|GO:0006355
Sebi441g00013 223 SUPERFAMILY DNA-binding domain 30 89 IPR016177 GO:0003677
Sebi441g00013 223 Pfam AP2 domain 29 79 IPR001471 GO:0003700|GO:0006355
Sebi441g00013 223 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
Sebi441g00013 223 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Sebi441g00013 223 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Sebi441g00013 223 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Sebi441g00013 223 MobiDBLite consensus disorder prediction 114 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00013 Sebi-Chr441 134662 135413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi441g00013 1 223 AP2-EREBP Transcription Factor Family AT1G50640 57.384 2.25e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi441g00013 AP2 6.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00013 K09286 - gmx:100820249 278.87