Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi441g00003 ATGGAGGAACCCACTTGGAATGATGATGCCATTGTCAAACTCAAGGCTAATTCTTCTACTGCTTCACCAGCCATGACATTTAGAGGGAAAAGACTTGTCATGGATAATGAGCTTGATCATTTCTTCCCTGAGAACAACAAGAAGGAAAAGACTACTACTTCTCACGAAGATGATCATCAAATGGTGCACCATGTAGATAATACCGGTAGCAACAGAACAACAGAGGAAGATGCAGCATCTGAAACTATGGATGATAATAAGAGAACTGAGTTTGTAGCTTTGGTAGCTGAATTGCACCAGATGAATGCTGAAAATCAACGTTTAAGAGAGTTGGTGGATGAGGTGAACAATAACTACAATGCCTTACACATGCAACTTATCAAGCTAATGCAGAAGCAGCAGGATAACCATAGGATTAACCAAGTCAAAGAGGAGAAAGGTAAGGGTGAAGATGTGGATCCAAGGCCAATTTTAGACATGGGATTTACTGAAAAGGATGAGAGCAAACTTAGAGAAAGCAAAAGCATGGTTGAGTTGATGGATTGCAAGGTGGATTGTGGAAGTAGGGAAAGTTCAAAAAGCAGAATGGATCAAGCATTATTTAACAAAGTTCCTAGATTGAGTTCTTTGGGGGACCAAGCATCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCAGTTAGAGCAAGATCAGAAACTCCTATGATTGCAGATGGATGCCAATGGAGAAAGTATGGACAAAAGATGGCGAAAGGGAATCCTTGTCCACGGGCTTATTATCGTTGCACAATGAGTACTGGTTGTCCTGTACGGAAACAAGTACAAAGGTGTGCTGAAGATCGAAGTGTGTTGATCACTACATATGAAGGGCAGCATAACCATCCACTGCCTCCCACTGCACAAGCAATGGCATCCACCACATCTGCAGCTGCCTCAATGCTTCTTTCAGGATCAATGCCAAGCTCAGATGGCCTAATTAATCCATCCATATTACAAACTGCTGCAATTCCCTGTTCACAAAACATGGCAACTCTATCTGCCTCAGCCCCATTTCCAACCATCACACTTGATCTCACTCAAACTGCTACCAATTCCTCACAGCTACAAAGGGAACCACAGGGCCAACTTAACCTCCTAGCTCCACTTTTGGCTCACAAGTTTATGTCAGCTCCAAAAGTTTTTGGACAATCCCTTTGTGATCAAACTAATAAGCTCTCTGCCTTCAATGAGTCTCAGGGTATAGACACAGCTTCATCATATGCTGACACATTAAATGCAGCTACGGCTGCTATAACTGCAGACCCAAATTTCACTGCAGCTCTTGTGGCTGCTATAACATCTATGATGGGAAGTTCACATCCAAACAACAATAATGGTAACAATAATTCATAA 1395 0.4208 MEEPTWNDDAIVKLKANSSTASPAMTFRGKRLVMDNELDHFFPENNKKEKTTTSHEDDHQMVHHVDNTGSNRTTEEDAASETMDDNKRTEFVALVAELHQMNAENQRLRELVDEVNNNYNALHMQLIKLMQKQQDNHRINQVKEEKGKGEDVDPRPILDMGFTEKDESKLRESKSMVELMDCKVDCGSRESSKSRMDQALFNKVPRLSSLGDQASETMSMIKKARVSVRARSETPMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTAQAMASTTSAAASMLLSGSMPSSDGLINPSILQTAAIPCSQNMATLSASAPFPTITLDLTQTATNSSQLQREPQGQLNLLAPLLAHKFMSAPKVFGQSLCDQTNKLSAFNESQGIDTASSYADTLNAATAAITADPNFTAALVAAITSMMGSSHPNNNNGNNNS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi441g00003 464 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 54 462 IPR044810 GO:0003700
Sebi441g00003 464 FunFam probable WRKY transcription factor 31 222 299 - -
Sebi441g00003 464 Coils Coil 91 132 - -
Sebi441g00003 464 SUPERFAMILY WRKY DNA-binding domain 230 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi441g00003 464 MobiDBLite consensus disorder prediction 63 86 - -
Sebi441g00003 464 Pfam WRKY DNA -binding domain 239 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi441g00003 464 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi441g00003 464 Gene3D WRKY domain 222 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi441g00003 464 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi441g00003 Sebi-Chr441 50762 53194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi441g00003 67 462 WRKY Transcription Factor Family AT1G62300 47.307 7.89e-104 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi441g00003 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi441g00003 - - vum:124848283 521.546