Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi440g00047 ATGCCTCGTGGGACTCTTGAAGTTATTTTGGTCAGCGCCAAAGGCCTTGAAGACAATGATTTTCTCTCCAGCATAGATCCTTATGTAATTCTCTCTTACCGAGCACAGGAGCACAAGAGCACTGTGCAAGAAGGTGCTGGATCCAACCCTCAATGGAATGAGAGCTTCCTTTTCACTGTTTCTGACAGTGCTTCTGAACTTAATCTAAGGATCATGGAAAAGGACAACTTCAGTAATGATGATTTTCTCGGTGAGGCAATAATTCCTTTGGATGCAGTGTTTGAAGAGGGTAGCCTTCCAGAGGCTGCTTACAATCTTGTGAAGGACCAAGAATATTGTGGGGAGATCAAGGTGGCTCTCACTTTTACTCCTGAGAGAAATGGTGGTGACCAGGGCTACATTGCAGAGGAGACCTTTGGAGGTTGGAAAGAATCAAATAGGGAATTTTAA 450 0.4422 MPRGTLEVILVSAKGLEDNDFLSSIDPYVILSYRAQEHKSTVQEGAGSNPQWNESFLFTVSDSASELNLRIMEKDNFSNDDFLGEAIIPLDAVFEEGSLPEAAYNLVKDQEYCGEIKVALTFTPERNGGDQGYIAEETFGGWKESNREF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi440g00047 149 Gene3D C2 domain 2 125 IPR035892 -
Sebi440g00047 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Sebi440g00047 149 PANTHER C2 DOMAIN-CONTAINING 1 126 - -
Sebi440g00047 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Sebi440g00047 149 SMART C2_3c 5 102 IPR000008 -
Sebi440g00047 149 Pfam C2 domain 4 101 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi440g00047 Sebi-Chr440 699265 700762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi440g00047 4 94 C2H2 Transcription Factor Family AT4G21160 34.066 4.47e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi440g00047 - - gmx:100500006 235.728