Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi440g00018 ATGCACAAGAACTTGTTCCTGTTGCTCTTGCTAGGCAAGAGAGACTTGTCTAGCCACCCTTGCTTCTCCAAGAATGCTCTTTGCAAGGAGCAAGTGCAGGCTGTGTCAAAGACACTCAGAGAAGCCATTGAATTGGCTGAGTTGTGTGTGAAGGAGAAAACTGGTGTGCTTGGTGAGGCTACTTTGCCACTGTCAGTGTCTGGGTCCTATATCAGAATCAGAGTATTGCAAGACACTCAGCAATATAAAAGAACTACTTGCAACGCCTTCAAATTGGTCATTTGGAAGCAAAAGCACAAAGCTTTAGACAGACTCTATGAAGTTATGAAAGAAGATGAGAAGAATGTTTTGTCTGTTCTTGGTAGGAGCAATGTTGCTGCTTTAGTTCAATTGCTTACAGGCACAGCAACATCTCCACGGATAAGGGAGAAGACAGTTACAGTTATATCTGTGGGTAAAGAGAAGGCTACAGTCTCACTTCAGAGGTTGTCAATGTCAGCGGAAACAACGCGCGCAATTGTTGGACATGGCGGGGTTCGACCATTGATTGAGCTTTGTCAAACTGGTGATTCTGTTTCACAAGCTGCTGCTGCTTGTGCTTTGAAGAATGTATCAGCTGTCCCTGAGGTGAGACAGGCTCTTGCTGAAGAAGGTATTGTGAAGGTTATGATCAATCTCCTTAACTGTGGAATTTTGCTAGGTTCCAAAGAGTATGCAGCTGAGTGCTTGCAGAATCTCACTGCAAGCAATGAGAATCTAAGAAGGTCTGTTATATCAGAAGGTGGTGTTAGGAGTCTTTTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCTGCAGTTGGGGTCATTGAGGAATTTGGTTGGATCAGTTCTGAGGAAATTTTGGTTTCTCTATGGATTGCTTCCCGTTTGATTCATGTGTTGAAGTCTGGATCTTTGGGTGCTCAACAAGCTGCTGCATCTGTTATCTGCAAGGTTTGCAGCTCAATGGAGATGAAGAAAATGGTTGGTGAAGCTGGATGCATACCTCTTCTTGTAAAGATGCTTGAGGCTAAAGCAAACAGTGCTAGAGAGATTGCTGCTCAAGCAATTGCAAGCTTAATGGTTCTGTCCCAGAACCGCAGAGAAGTTAAGAGAGATGATAAAAGTGTGCCTAATCTGGTTCAGTTGCTTGATCCAAGTCCACAGAACACAGCTAAAAAATATGCTGTTTGTTGCCTTGGATCACTTTCTTCATGTAAGAAATGTAAGAAATTGATGATTTCTTATGGAGCAATTGGGTATCTGAAGAAGCTTACAGAGATGGACATTCCAGGAGCTAAGAAGCTGCTTGAACGATTGGAAAGAGGGAAATTGAGAAGCTTGTTTAGCAGAAAATAG 1380 0.4297 MHKNLFLLLLLGKRDLSSHPCFSKNALCKEQVQAVSKTLREAIELAELCVKEKTGVLGEATLPLSVSGSYIRIRVLQDTQQYKRTTCNAFKLVIWKQKHKALDRLYEVMKEDEKNVLSVLGRSNVAALVQLLTGTATSPRIREKTVTVISVGKEKATVSLQRLSMSAETTRAIVGHGGVRPLIELCQTGDSVSQAAAACALKNVSAVPEVRQALAEEGIVKVMINLLNCGILLGSKEYAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGVIEEFGWISSEEILVSLWIASRLIHVLKSGSLGAQQAAASVICKVCSSMEMKKMVGEAGCIPLLVKMLEAKANSAREIAAQAIASLMVLSQNRREVKRDDKSVPNLVQLLDPSPQNTAKKYAVCCLGSLSSCKKCKKLMISYGAIGYLKKLTEMDIPGAKKLLERLERGKLRSLFSRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi440g00018 459 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 97 150 - -
Sebi440g00018 459 SUPERFAMILY ARM repeat 97 439 IPR016024 -
Sebi440g00018 459 Gene3D - 293 438 IPR011989 -
Sebi440g00018 459 Pfam Armadillo/beta-catenin-like repeat 168 205 IPR000225 GO:0005515
Sebi440g00018 459 SMART arm_5 329 369 IPR000225 GO:0005515
Sebi440g00018 459 SMART arm_5 207 248 IPR000225 GO:0005515
Sebi440g00018 459 SMART arm_5 166 206 IPR000225 GO:0005515
Sebi440g00018 459 SMART arm_5 249 288 IPR000225 GO:0005515
Sebi440g00018 459 SMART arm_5 371 412 IPR000225 GO:0005515
Sebi440g00018 459 Gene3D - 98 292 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi440g00018 Sebi-Chr440 182529 184160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi440g00018 303 442 U-box Gene Family AT2G23140 29.787 1.37e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi440g00018 - - gmx:100809488 635.565