Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi440g00001 ATGATTTTTAGGACACTCCTACTATTCCTGGCCTTTATGGTGACAAATTCAGTGGCTCTCATTGACAAACAGACATATATAATACACATTGACAATGCCAAGATCAGAGCCTCAGTTCATTCCCAAGACAGTACAAGACCCTGGTTTAAATCAGTCATTGATTTCATCTCTGAAGTTTCACTGGAAAAAGAAGAAGAGATAGCCCCTGAGCTTCTTTATGTTTATGAAACCAATATGTTTGGTTTTGCTGCCCAACTTTCCGATCAACAACTTGAATACTTGAACCAAGTGGATGGTTTCCTTTCAGCCATACCTGATGAGTTATTAGCTCTCCACACAACATACACCCCACATTTTCTTGGCCTACAGAATGGAAGAGGACTTTGGAGTGCTCCTAACTTGGCCTCAGATGTGATCATAGGGGTCCTAGATACTGGGATATGGCCTGAACACATCAGTTTCCAAGACTCAGGTTTGTCCACAGTACCCTCTCGTTGGAAAGGTTCTTGTGAAGAAGGCACCAATTTCTCTGCCTCAAATTGTAACAAGAAGCTTATTGGTGCAAGAGTCTTCCTCAAAGGGTATGAAAAGTTTGCTGGAAGAATCAATGAAACTTTGGATTATCGTTCTGCTAGAGACTCACAAGGGCATGGAACACACACAGCATCAACTGCAGCTGGTAATATGGTGAATAATGTCAGCTTTTTAAGCATTGAAAGAGGTTCAGCCAGTGGAATGAGGTACACCTCAAGAATTGCAGCTTATAAAGTATGCTGGCGTTTAGGCTGTGCTAACTCTGATATATTGGCAGCTATGGATCAAGCTGTTGCTGATGGGGTTGACATATTATCACTCTCTTTAGGTGGTGTTGCCAAACCTTATTACAATGATAGTATTGCCATAGCCTCATTTGGAGCAACACAAAGTGGAATTTTTGTTTCTTGTTCTGCAGGAAATTCAGGCCCCTCTATATCAACTGTTGGAAATGTTGCCCCATGGCTCATGACTGTTGCTGCTAGCTACACTGACAGGAGCTTCCCTACAAAAGTGAAGCTTGGGAATGGACAGATTTTTAAAGGGTCATCTTTATATCAGGGCAAGGGAACAACCCAATTGCCTCTTGTGTATGGCAATTCTTCAAAAGCACAAAGGACAGCACAGTATTGCACTAGAGGCTCACTTGATCCAAAATTTGTGCATGGAAAAATAGTTATTTGTGAAAGAGGAATAAATAGTAGAACTGAAAAGGGAGAGGCAGTGAAGATGGCAGGTGGAGCAGGAATGATACTACTCAACTCAGAAAATCAAGGAGAAGAGCTTATTGCTGACTCTCACATTTTGCCAGCCACTGCCATAGGGGCCTCAGCAAGTAAAAAAATTAGAAGCTATATTCACTCAGCAAAAGCACCAACAGCTTCAATTTCCTTCATAGGGACAAAATATGGAGATCCTGCACCAGTTATGGCAGCTTTTTCTTCTAGAGGACCAAGTGCAGTGGGACCAGATGTGATTAAGCCAGATGTGACTGCACCTGGTGTGAACATCTTGGCTGCTTGGCCACCCACAACTAGCCCAAGCTTGCTCAAGAGTGACAAAAGAAGTGTACTATTTAACATAGTTTCAGGTACATCAATGTCATGTCCTCATGTTAGTGGCATAGCTGCACTGCTTAAATCTGTGCATAAGGATTGGTCTCCTGCAGCTATCAAATCTTCTCTGATGACTACAGCTTACACATTAAATAATAAAGGTGCTCCAATTGCTGACATTGGCTCAAATAACTCTGCTGCATTTGCTAACCCCTTTGCATTTGGTTCAGGCCATGTTAACCCAGAAAGAGCTTCTGATCCAGGGTTAGTGTATGATATCACCAACAAAGACTACTTAAATTACTTGTGCAGCCTGAACTATACCCCTTCTCAGATTACTTTATTGTCAAAAGGCAAGTTTACATGTACCAAAAATTCAGTTCTCCAAGCTGGTGACTTGAACTACCCTTCATTTGCTGTGATATTTAGCACAAGTGCTCTAAACGCTAGTGTGACATACAAGAGGGTAGTCACAAATGTAGGAAATCCCAAAAGTTCATATGCAGTTAAAGTGGAAGAACCAAAGGGAGTATCAGTGATGGTTGAACCAAGGAGTTTGAGTTTTAGAAAACTGGGTGAGAAATTGAGTTACAATGTGACTTTTGTTGCATATGGAAGAACAATAGCTACTGGTAGTTCATCATTTGGGTCACTTACTTGGGTATCAGGTACATATGTAGTTAGAAGTCCTATAGCATTGATCTGGCTATAG 2301 0.4146 MIFRTLLLFLAFMVTNSVALIDKQTYIIHIDNAKIRASVHSQDSTRPWFKSVIDFISEVSLEKEEEIAPELLYVYETNMFGFAAQLSDQQLEYLNQVDGFLSAIPDELLALHTTYTPHFLGLQNGRGLWSAPNLASDVIIGVLDTGIWPEHISFQDSGLSTVPSRWKGSCEEGTNFSASNCNKKLIGARVFLKGYEKFAGRINETLDYRSARDSQGHGTHTASTAAGNMVNNVSFLSIERGSASGMRYTSRIAAYKVCWRLGCANSDILAAMDQAVADGVDILSLSLGGVAKPYYNDSIAIASFGATQSGIFVSCSAGNSGPSISTVGNVAPWLMTVAASYTDRSFPTKVKLGNGQIFKGSSLYQGKGTTQLPLVYGNSSKAQRTAQYCTRGSLDPKFVHGKIVICERGINSRTEKGEAVKMAGGAGMILLNSENQGEELIADSHILPATAIGASASKKIRSYIHSAKAPTASISFIGTKYGDPAPVMAAFSSRGPSAVGPDVIKPDVTAPGVNILAAWPPTTSPSLLKSDKRSVLFNIVSGTSMSCPHVSGIAALLKSVHKDWSPAAIKSSLMTTAYTLNNKGAPIADIGSNNSAAFANPFAFGSGHVNPERASDPGLVYDITNKDYLNYLCSLNYTPSQITLLSKGKFTCTKNSVLQAGDLNYPSFAVIFSTSALNASVTYKRVVTNVGNPKSSYAVKVEEPKGVSVMVEPRSLSFRKLGEKLSYNVTFVAYGRTIATGSSSFGSLTWVSGTYVVRSPIALIWL 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi440g00001 766 Pfam PA domain 372 458 IPR003137 -
Sebi440g00001 766 FunFam Subtilisin-like protease SBT1.5 632 766 - -
Sebi440g00001 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 112 IPR037045 -
Sebi440g00001 766 FunFam subtilisin-like protease SBT1.5 343 481 - -
Sebi440g00001 766 CDD PA_subtilisin_like 350 474 - -
Sebi440g00001 766 SUPERFAMILY Subtilisin-like 111 619 IPR036852 GO:0004252|GO:0006508
Sebi440g00001 766 Gene3D - 632 764 - -
Sebi440g00001 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 762 IPR045051 -
Sebi440g00001 766 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252|GO:0006508
Sebi440g00001 766 Gene3D - 343 481 - -
Sebi440g00001 766 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Sebi440g00001 766 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Sebi440g00001 766 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Sebi440g00001 766 Pfam Subtilase family 136 585 IPR000209 GO:0006508|GO:0008236
Sebi440g00001 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Sebi440g00001 766 Pfam Peptidase inhibitor I9 25 111 IPR010259 -
Sebi440g00001 766 CDD Peptidases_S8_3 111 578 IPR034197 -
Sebi440g00001 766 Pfam Fibronectin type-III domain 662 762 IPR041469 -
Sebi440g00001 766 ProSiteProfiles Serine proteases, subtilase domain profile. 114 615 - -
Sebi440g00001 766 FunFam Subtilisin-like protease SBT1.5 137 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi440g00001 Sebi-Chr440 30532 32832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi440g00001 23 765 Subtilisin-like Serine Gene Family AT1G01900 56.586 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi440g00001 - - gmx:100817581 1312.75