Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi43g00074 ATGGCATCTTCAAATTCACCATGTGCAGCATGCAAATTTCTAAGGAGAAAGTGTCAACCAGAGTGTGTGTTTGCACCTTATTTCCCACCTGATCAGCCCCATAAGTTTGCAAATGTTCACAGAATCTTTGGTGCTAGCAATGTCTCCAAACTTCTCAATGACTTGCACCCTTATCAACGTGAAGATGCTGTAAATTCCCTTGCCTATGAAGCAGAGATGCGCCTCCGCGACCCTGTCAATGGCTGTGTAGGAATCATCTCACTCCTTCACCATCAGCTCCGCCAGCTACAAATGGACCTTTTCTGTGCCAAATCTGAGCTTTCAAGAATCCAAAACATTGGCATGGTCAATACCGGCCATGGCCTCATTGCTGCCACGGCCACCACAGCCAACCAACACACTATGATAAACATCAGTAGTGGTGGCCATCACCATCAACATCAACATCAGTTTTTTCCTAGGGATCAATATCAGCAACAGCAGCATGTAGTTAGGAACTTTGACTCAGGGAACTACTATGAGGCTAATGTATTGGCTATGAACATATCTACAAGTTTTGGGCAACTAAATCAGATTCAGCAGCCTAGTGCTGCTGCTGCTGGTGATGACCACCACACTGTCCATCCCTCTTAG 633 0.4581 MASSNSPCAACKFLRRKCQPECVFAPYFPPDQPHKFANVHRIFGASNVSKLLNDLHPYQREDAVNSLAYEAEMRLRDPVNGCVGIISLLHHQLRQLQMDLFCAKSELSRIQNIGMVNTGHGLIAATATTANQHTMINISSGGHHHQHQHQFFPRDQYQQQQHVVRNFDSGNYYEANVLAMNISTSFGQLNQIQQPSAAAAGDDHHTVHPS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi43g00074 210 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Sebi43g00074 210 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Sebi43g00074 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi43g00074 Sebi-Chr43 2554283 2554915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi43g00074 2 210 AS2 family AT1G65620 59.809 9.48e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi43g00074 LOB 7.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi43g00074 - - gmx:100819502 291.197