Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi43g00046 ATGGAGCTTGATTTGAATCAGGAGCCTCTGGACCCAACCCGTAGTTCAGTAATTGAACTTGATTCTATATTGAATGAACTAGAATCTGCCCAGGCACATATACAGGACCGTATTAGACACCTTGAAGCAGTAACTTCCAGAGCTAGGCAGCGTCACAGGTGGCCACCGGTTCACTCTCCGATTCAGATAACCAACTTTACTGGAGAAGCCGCGGCAAATGATGCTCAAGGTGAAGAAAGGGAGCACCAGGAAGATGGGGAAGGGATAGTTGAAAGTGGGAAAGAGGGCAAAAGGGAAGGTGGTGCCTGTTTAATAGCTAGAGCTTTAGGGATGAAAGAAACATATGCTACTATGCCAGGGTTGTCATATACTTATTCAAATGTAAAGGAATGCCCTGTTTGTCATGGAGAGGTAACTGAAAAGGGCATTATTCCAATTTATGGCAATGCAAGGGCAAGTGATGATTGTCAGTTGGATTTGAAAGAAACTGGTTTGAGAGTTCCTCCTCGACCTCGGGCACCCAGAATTGAGTGTGTTAGGCAGCAGCTAATAAGCCAAGGAGCATCTTCTTCTGTAGTTGAAAACATTCGGCGGTTTAGTAACCTTATTGGTGGACTAGGAGAGCGAGTTCAATCAGAAAGCTCCAATGCTGCAACTGTTAGAAATAATAGTTTTCTCATTCATTCTCATCCACAGTCAGACAACCATCAACATACTGGTTCTCCTCCAATTTCAAGGTTTTTAGAGCAAGGAGCTGCTTCATTTTCATCCCTTTCATCAGCATTAAATTCTGCAATGGATTCTGCAGAGAGATTAGTTCAGGACCTTGAATCATATATCCATGACCGCCACTTAGGAGGAAGCAGGCAGTTAAATCCCCATGATGTTATTAGAAATTCAACTTTTAGTGTTGCCGGGACAAGCTGGTCAGCGAGTCTTACTACAAATGTTGCTGCAACCAATTCTGCAGCTGCAGCTTCTTTGTCTCCGATAAGTAGGAATGTTAACACAGTTGCTGTTACAGGCTCAGAAGCCCAGACAACAGATAGTAATGTACAGATTAGTCCAATAGACCCTTCTTCATCTTACAGTAGAAGAACTAATATTTCAAGACAAGATTCAAATGGGCGAAGAAGAAGATTGAGATGA 1149 0.4299 MELDLNQEPLDPTRSSVIELDSILNELESAQAHIQDRIRHLEAVTSRARQRHRWPPVHSPIQITNFTGEAAANDAQGEEREHQEDGEGIVESGKEGKREGGACLIARALGMKETYATMPGLSYTYSNVKECPVCHGEVTEKGIIPIYGNARASDDCQLDLKETGLRVPPRPRAPRIECVRQQLISQGASSSVVENIRRFSNLIGGLGERVQSESSNAATVRNNSFLIHSHPQSDNHQHTGSPPISRFLEQGAASFSSLSSALNSAMDSAERLVQDLESYIHDRHLGGSRQLNPHDVIRNSTFSVAGTSWSASLTTNVAATNSAAAASLSPISRNVNTVAVTGSEAQTTDSNVQISPIDPSSSYSRRTNISRQDSNGRRRRLR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi43g00046 382 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 125 252 IPR045103 GO:0005783|GO:0006511|GO:0061630
Sebi43g00046 382 MobiDBLite consensus disorder prediction 74 95 - -
Sebi43g00046 382 MobiDBLite consensus disorder prediction 342 370 - -
Sebi43g00046 382 MobiDBLite consensus disorder prediction 71 95 - -
Sebi43g00046 382 MobiDBLite consensus disorder prediction 342 382 - -
Sebi43g00046 382 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi43g00046 Sebi-Chr43 1466894 1468146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi43g00046 86 368 C3H Transcription Factor Family AT3G58030 28.889 1.65e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi43g00046 - - cam:101488454 382.874