Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi43g00044 ATGGCAGCTGAATTGGTAGGAGGGGCTTTTCTCTCTGCTTTGGTCCAAACTATGTTTGAGAGGATGGCCACTCGTGAGATGCTAGACTTCATTAGAGGAATAAAACATGACAATGGTCCTAACCTGCTACACAAGTTGAAGATAACATTACGGTCTGTTGATACTGTGGTCAACCATGCTGAGGAGAAGCAGACTCAAGATTTGCACATAAGGGAATGGCTGAATGATCTCAAGGATGCCATGTTTCAAGCAGAAGACCTTTTGGATAAGATCAATGCTTCACCTTCAAGGCAGAAAAAACTGGAAGGTGTGTTATGGAGTAGCAGCACAAGCAAGGTATGTTACTCTTCACTTGGTAGTTTTAGTGAAAGGATGGAGAACATTATAGAAGAATTAGAAACTCTTGTGCAACAAAAGGATGTCTTGGGTTTGAGGGAAGATGTCCATCAGATACCATCTAGAAAACTTCAAACAACTTCTTTAGCAGGAAAATCTTCTATCTATGGAAGAAATGTTGATAAGAACAATGTTATCAATCTTTTGCTTTCAGTGTCAGGTTATGGTAATGATAAGATATGTGTCTTACCCATAGTTGGTATGGGAGGAGTTGGGAAGACCACTCTTGCTCAACTTGTATACAATGATGAAAAAGTAAAGCAACATTTTGACATCAAAGCATGGGTTTGTGTTAACCAAGAATTTGATGTCTTCAAATTGACCAAGACCATTCTGGAAGCAATCCCTTTAACATGTGATGCAATGGATCTTAACTTACAGCAGATTAAGTTGAAAGAGTTCCTTCATAACAAGAGATTTTTAATTGTTTTAGATGATGTTTGGAACGAAAGTTGTGCCATGTGGGAGATTTTAATGCGTCCATTTGAATTTGGAGGTCAAGGAAGTTGTGTCCTAGTAACAACCCGCAATGAAAATGTTGCATCAGCTATGTCAGCTATGCTTACTGTTCCAATTCAAAGTTACCATTTAAAACCACTAGCACATGATGATTGTTGGTTGCTGTTTTCTGAGCATGCATTTGATGGGGGAAGGTTCATAAAAAGTACTGAGCTGGAAGATATTGGCAGAAAGATAGTGAAAAAATGCAGGGGACTGCCATTGGCAGCAAAAGCCCTTGGGGGTCTCTTGCGGTCAAAAGTAGATATAAGAGAATGGGTGAAGGTTCTGGAAAGTAAAATATGGGACTTTCCAAATGATAGGATCAATATTCTTCCAGCTCTCATGTTGAGCTATTACTATCTTCCTTCAACTCTTAAGCGTTGTTTTGCTTATTGCTCCATATTTCCTAGAAGCTACCAATTTAGAAGAAAGGAACTAGTGCGCTTGTGGATGGCAGAAGATCTTCTACCACATCCCAAAAGAAGTGGAAATGTGGAAGAACTTGGTACTGAATACTTTAATGATCTAGCATCAAGATCATTCTTTCTTAATTCAAGTAGGAAACGCTTTATCATGCATGATCTCATTGTTGATTTAGCTGAATTTGTCTCAGGAGAGTTCTCATTCAGATTGGAGGGAGAGAAGAATAGTCATCTGTCAAAAAGAACTCGCCATTTGTCATATTCAAAGCTTCAGTTTGATGATTTGGAGAAAATTACAGCTACATGTCAAAACCTACGGACTTTTCTTCCATCACAAGTTTTGTCATGGCCAAGATGTCTGAACTATGATGCTGTGGGCAGCTTAATATCAAATCATAAAAGTTTAAGGGTCCTTTCTTTCTCACACTGTGGTAATTTGACAGCTTTACCTGAATTCTTCGGTGACTTGATACATTTAAGATATCTAGACCTCAGTTTCACTCCAATCTCCAAGTTACCTGAGTCCACATGTTCTCTGTATAATTTGCAGACTTTGTTGTTGATAAACTGTGTTTATCTTACTGAATTGCCTATCAAAATGGGAAAGCTAACCAACTTAAGGTGCTTGGATATTAGGGGAACAAACTTAAATGAAATGCCACCTCATATGGGTAGTTTGACAAATCTTCAAACCTTAACTGGATTTGTTCTGGGCAGTGGACAAGGGTCAGGCATTGAAGAGCTGAAGAATTTTCCTTCTCTTAAGGGAAAGATCTCTATTTCAAATCTCCAAAATGTCATTGATCCACCTAATGATATGAAGGCTAATTTGTTGGGAAATATGCAACTTAATGAGTTAATGTTGAGTTGGAGCAAAAATGCAGATGATTCAAAAAATGTTAGAAGTGTATTGCATTGGTTGGAGCCTCCTAAGACCTTGGAAAAACTTACCATTAGAAATTATGGTAGCACTTCATTCCCAGCCTGGTTAGGAGATTTTCAGTTCTCAAAGTTAGTATCTGTAGGCCTGTATGATTGTGTAAATTGTCTTTCTTTGCCAACACTGGGGAAATTGCCTTCCTTGAAAGCCCTCTCATTGGTGGGGTTCATGATTGTCACTCATATTGATGGTGTGTTTTACAACAATTTTTCTATGGAAGCTAAGCGATCTCAGAGACACAATACTGTACCATTTAGGTGCCTTGAGACTTTGCGTTTTGAGAACATGCCACAATGGAAAGAATGGCTTCCTTTTGAGGAGGAAGGGAAGGAAGATGAAGATGGGGCATTTCCTTGTCTTAAACAACTTTATATAAAAAATTGCCCTAAACTAAAAGGCTTGAACTTGATCCAAAAACTACCTGCTCTAGAAAAGATTGTGATTACAAATTGTCAACAGCTTGTGGTTGCAGTTCCCCCAACAATCTGTGAATTGCAATTAGAATGTTGTGAGAAGGTTTCAATCCAAAGGCCACTGCCTCAATTATTGAACCTGACAATCAGAAGCTATAATGCAGTAGAGTCACTATTTGAGGGAATAGACAACAGAAGTTGTTGCATTGAAAAATTGAGCATCTCAAGTTGTCCTCTCATAAGGCAGCTCCCTAGTAATGGAATTGCAAACACATTAAAATCACTCAACATTACTAACTGTGAGAAAGTTGAGTTTCCTATGAACCAATGCTTTGCATATCTTGAGAGCTTATGCATCAAATGGAGCTGTAATTCCCTGGGGTCTTTCATAATGGACTTGTTTCCAAAGATGGTCCACCTTGAAATACAAGGATGTCAGGCTCTAGAGTCTCTTCTAGTTTCCAGGGTGCATGTGCAACATCTACAATCTCTGAATTCCTTAAAGATCTGTGATTGTCCTAATTTTGTATCTTTCCCTGAAGGTGGACTCCCTGCTCCAAAACTGACAAATTTACATTTGGAAAAATGTAAGAAATTGAAGTTCCTTCCTTGGCAGATGAAGGAGCTGCTCCCATCCCTCATGACATTGAACTTAAAAGAGTGTCCAGAACTTGAATCATTTTCAGAGGGAGGCTTGCCAGATAGTCTGAATGTACTTGAGATCTTTCATTGTTCTAAACTGTTTACCAACAGAAAAAACTGGGATTTGCAAAGACTTCTCTCTCTTCAAAGCTTTGCTATTGCAGATACATGTCAAGATGGGGAATCCTTTCCTGAAAGAGAGTTGCTGCCATCCACTCTAACATCCTTTCATATCCTTGCACTTTGGAATTTGAAGTATCTAGATGGGGACAGCCTTCAGCAATTGGCATCTCTAGAGACTCTGGGGATTGCATGCTGCCCAAAACTTCAGTGTATGCCGGCAAAGCTTCCTTCTTCAATTTCTGCTCTTCATATCATGAAATGTCCAAGACTTGAAGAAAAATGTAAAGGAAAGGAATCTGAAGATTGGTCCAAAATTGCTCACATTCCCATGATACGGATCAATAAGAAATTGGTCCAATAG 3798 0.3886 MAAELVGGAFLSALVQTMFERMATREMLDFIRGIKHDNGPNLLHKLKITLRSVDTVVNHAEEKQTQDLHIREWLNDLKDAMFQAEDLLDKINASPSRQKKLEGVLWSSSTSKVCYSSLGSFSERMENIIEELETLVQQKDVLGLREDVHQIPSRKLQTTSLAGKSSIYGRNVDKNNVINLLLSVSGYGNDKICVLPIVGMGGVGKTTLAQLVYNDEKVKQHFDIKAWVCVNQEFDVFKLTKTILEAIPLTCDAMDLNLQQIKLKEFLHNKRFLIVLDDVWNESCAMWEILMRPFEFGGQGSCVLVTTRNENVASAMSAMLTVPIQSYHLKPLAHDDCWLLFSEHAFDGGRFIKSTELEDIGRKIVKKCRGLPLAAKALGGLLRSKVDIREWVKVLESKIWDFPNDRINILPALMLSYYYLPSTLKRCFAYCSIFPRSYQFRRKELVRLWMAEDLLPHPKRSGNVEELGTEYFNDLASRSFFLNSSRKRFIMHDLIVDLAEFVSGEFSFRLEGEKNSHLSKRTRHLSYSKLQFDDLEKITATCQNLRTFLPSQVLSWPRCLNYDAVGSLISNHKSLRVLSFSHCGNLTALPEFFGDLIHLRYLDLSFTPISKLPESTCSLYNLQTLLLINCVYLTELPIKMGKLTNLRCLDIRGTNLNEMPPHMGSLTNLQTLTGFVLGSGQGSGIEELKNFPSLKGKISISNLQNVIDPPNDMKANLLGNMQLNELMLSWSKNADDSKNVRSVLHWLEPPKTLEKLTIRNYGSTSFPAWLGDFQFSKLVSVGLYDCVNCLSLPTLGKLPSLKALSLVGFMIVTHIDGVFYNNFSMEAKRSQRHNTVPFRCLETLRFENMPQWKEWLPFEEEGKEDEDGAFPCLKQLYIKNCPKLKGLNLIQKLPALEKIVITNCQQLVVAVPPTICELQLECCEKVSIQRPLPQLLNLTIRSYNAVESLFEGIDNRSCCIEKLSISSCPLIRQLPSNGIANTLKSLNITNCEKVEFPMNQCFAYLESLCIKWSCNSLGSFIMDLFPKMVHLEIQGCQALESLLVSRVHVQHLQSLNSLKICDCPNFVSFPEGGLPAPKLTNLHLEKCKKLKFLPWQMKELLPSLMTLNLKECPELESFSEGGLPDSLNVLEIFHCSKLFTNRKNWDLQRLLSLQSFAIADTCQDGESFPERELLPSTLTSFHILALWNLKYLDGDSLQQLASLETLGIACCPKLQCMPAKLPSSISALHIMKCPRLEEKCKGKESEDWSKIAHIPMIRINKKLVQ 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi43g00044 1265 Gene3D - 14 137 - -
Sebi43g00044 1265 Pfam Rx N-terminal domain 10 107 IPR041118 -
Sebi43g00044 1265 Gene3D - 332 415 IPR042197 -
Sebi43g00044 1265 Gene3D Ribonuclease Inhibitor 980 1138 IPR032675 -
Sebi43g00044 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 431 IPR027417 -
Sebi43g00044 1265 Gene3D - 416 501 IPR036388 -
Sebi43g00044 1265 FunFam Probable disease resistance protein At1g61300 149 319 - -
Sebi43g00044 1265 Gene3D Ribonuclease Inhibitor 531 940 IPR032675 -
Sebi43g00044 1265 SUPERFAMILY L domain-like 491 912 - -
Sebi43g00044 1265 PANTHER DISEASE RESISTANCE PROTEIN RP 45 985 IPR044974 GO:0006952
Sebi43g00044 1265 Coils Coil 74 94 - -
Sebi43g00044 1265 Coils Coil 118 138 - -
Sebi43g00044 1265 Gene3D - 147 322 IPR027417 -
Sebi43g00044 1265 PRINTS Disease resistance protein signature 266 280 - -
Sebi43g00044 1265 PRINTS Disease resistance protein signature 570 586 - -
Sebi43g00044 1265 PRINTS Disease resistance protein signature 368 382 - -
Sebi43g00044 1265 PRINTS Disease resistance protein signature 194 209 - -
Sebi43g00044 1265 SUPERFAMILY L domain-like 870 1252 - -
Sebi43g00044 1265 SMART LRR_typ_2 643 666 IPR003591 -
Sebi43g00044 1265 SMART LRR_typ_2 596 619 IPR003591 -
Sebi43g00044 1265 Pfam NB-ARC domain 176 396 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi43g00044 Sebi-Chr43 1285459 1289256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi43g00044 197 817 WRKY Transcription Factor Family AT5G45050 25.637 4.89e-14 75.5