Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi43g00020 ATGGAGGAGAAAGCAGAGAACCAAGATAATAACCACCCATCTCTCCTCCCTAATCATAACACCACCAAGGAAGAGTCACCAAGAAAACCCATTATTGGTGGTAGTAGTGATAGGCTGAAGAGGGATGAGTGGAGTGAAGGAGCTGTGTCTACCCTTCTTGAGGCCTATGAAGCCAAGTGGGTGCTTAGAAACAGAGCAAAACTCAAAGGCCATGATTGGGAAGATGTTGCAAAATATGTTTCATCAAGAGCAAACTCCACCAAATCACCAAAGACACAAACACAGTGCAAGAACAAGATAGAGTCCATGAAGAAAAGCAATAACCAAGCCTTGATTTTGTTAGAGCCATCACTTGCAGTGTCACAAGTTCCCCATCAACCACCTCCTCCATTTGCTCCTCCACCACTTCCAACAGAACAAAACTCACATGGATCCAATGGTGTTGATAGATTAGCCAAGGAGGAAGGATTAGGAACTACAAAGTCTTCTGACCATGTGTCTAACAAGAATAATCCATTGGATACTGATAGCAGCACACCAGCTCTTTATAGTGAAAAGGACAAGAGCATAAGGTGGCTAGCAGAAGTGGTGGTAAGGTCAGAACAAACAAGAATGGACACATTGAAAGAGATAGAGAAGATGAGAGTTGAAGCTGAGGCAAAGAGAGGGGAAATGGATCTCAAGAGAACTGAAATCATTGCCAATACTCAATTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCATCATTGAGAATTGGAAGAAGTTAA 783 0.4227 MEEKAENQDNNHPSLLPNHNTTKEESPRKPIIGGSSDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVAKYVSSRANSTKSPKTQTQCKNKIESMKKSNNQALILLEPSLAVSQVPHQPPPPFAPPPLPTEQNSHGSNGVDRLAKEEGLGTTKSSDHVSNKNNPLDTDSSTPALYSEKDKSIRWLAEVVVRSEQTRMDTLKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi43g00020 260 Pfam Myb/SANT-like DNA-binding domain 41 106 IPR044822 -
Sebi43g00020 260 FunFam Trihelix transcription factor ASIL2 44 108 - -
Sebi43g00020 260 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 23 105 IPR044823 -
Sebi43g00020 260 MobiDBLite consensus disorder prediction 122 137 - -
Sebi43g00020 260 MobiDBLite consensus disorder prediction 121 182 - -
Sebi43g00020 260 MobiDBLite consensus disorder prediction 1 43 - -
Sebi43g00020 260 MobiDBLite consensus disorder prediction 22 43 - -
Sebi43g00020 260 MobiDBLite consensus disorder prediction 161 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi43g00020 Sebi-Chr43 417580 419429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi43g00020 29 109 Trihelix Transcription Factor Family AT3G14180 39.506 3.66e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi43g00020 Myb_DNA-bind_4 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi43g00020 - - qsa:O6P43_029704 332.413