Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi43g00019 ATGGTCCGGCTCGGCGCGGTTCCCGCCCTTTTCGGCCTCTTGGCAAATGCGAGGAAGAGAAAAACCGGTATAATTGAGGACGCTACGGCGGTGATTGCGCAGATCGCGGGGTGCGAGGAGAGCGAGGAAGCGTTTCGGAAGGTTTCAGGGATTCCGGTTTTGGTGGGTTTGTTAGGTTTCGTTTCTGGAAGCTGTGGTGGTGGTTTGAGGACCAGGGAGAATGCGGTTTCCGGGTTGTTGAATTTGGTGAGGTATGGAGGGGATAGAGTTGCTTTGGAGGTTAAAGAGAGAGGTGATGTGTTGGATGGGATTGTGTATGTGCAAGAACATGGTAGCACCAAAGGGAAGAGCAAAGCTGTGGCTTTGTTGAAGCTTTTGCTTGAAGGTGGAAGCAATGACAAAATTGTTGAAGATTTGTATCCTGTTGAGTCACACGTGTGA 441 0.5057 MVRLGAVPALFGLLANARKRKTGIIEDATAVIAQIAGCEESEEAFRKVSGIPVLVGLLGFVSGSCGGGLRTRENAVSGLLNLVRYGGDRVALEVKERGDVLDGIVYVQEHGSTKGKSKAVALLKLLLEGGSNDKIVEDLYPVESHV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi43g00019 146 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 5 50 IPR000225 GO:0005515
Sebi43g00019 146 Gene3D - 1 134 IPR011989 -
Sebi43g00019 146 PANTHER U BOX DOMAIN-CONTAINING 1 126 - -
Sebi43g00019 146 SUPERFAMILY ARM repeat 2 130 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi43g00019 Sebi-Chr43 364716 365156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi43g00019 2 126 U-box Gene Family AT1G23030 27.200 1.01e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi43g00019 - - gmx:100803111 168.318