Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi43g00015 ATGGCATTGGTCTCTGGTGCTTTCTATATGATTTCCAGTTTGTGTGGTCGTCGTCAAAGTTGGCGCTTGAGGGTGAAGTTGGTCAGGGCTTGGAACATGTGTTCTCTGGCAAAGCCTGATGACCCATTTGCGTTGGAGATGGTTTTTATCGATGAAGAGGCCACTGTTGCAAAGCAACACATGATGAGGTTTGCCCAAGATGTCGTTGAGGGTCAAGTGTACAGGCTAACTAACTTTGGATTGACGGCTAATTCTGGGAAGTTCCGAGCAGCTGCTCACGAATTTAAGCTGGTGTTTAACGCCGGAACGAGACTGATTCCTTGCCACTCTGTCCCTATACCTCTTTCTGGTTTGTCGCTGGTGAAGTCTTCAGAAATTAAGGAAACAAATGGCTGCTCTAATTTCCTTCTAGATTTCATGGGTGTCCTCACTGCGGTGTCGGAGGAAATAAACATGAAGAAGCAGGGCTGGGAGACACGACTCATGCTACTGGATTTAGTGGATGAAATGTGTGCTATTTTTGGAGATATGGTTGATGTGGTTGCAGGATTTATTAACGTTCCTAGGAGTGGCCTTCCTGTGGTTATCATCCAGTTTGCAAAGATCAACACCTATAAGGGTGTTGTTGGGATCCAAAATGTTATGAATGCATATAAGATTTCTTGGAATCCTGACTTACCAGAGGTCATTGAGTTTAAAAATGGCCTAGCTGTGCATGAGATAGAGACAGATGTCTCGATTGGTTTCATTAGCGACCGTAGCCGTCATGATGGATGTTTCATTGTGATGGGAATCATTGAAGAAGTTATTCTCGAAGAGAATTGGTGGTATTTTGCCTGTTCATGCATGAAAGCCCTGTCATTTGATCTTGTGAAAGAGGACCAAGGAGTTGCTATGGGGATAGATTTTCACGACGATGGAGGCTTACCAATGGCTGTTGCTACCAGATTCAGATTGGTTGATTGGGAGCCAAGAATCGTTGAAGCAATGATCACACTCCTCCCGGTAGAACAAGCTCGTGACCTGTTGTTTACCCATGTTTAA 1044 0.4454 MALVSGAFYMISSLCGRRQSWRLRVKLVRAWNMCSLAKPDDPFALEMVFIDEEATVAKQHMMRFAQDVVEGQVYRLTNFGLTANSGKFRAAAHEFKLVFNAGTRLIPCHSVPIPLSGLSLVKSSEIKETNGCSNFLLDFMGVLTAVSEEINMKKQGWETRLMLLDLVDEMCAIFGDMVDVVAGFINVPRSGLPVVIIQFAKINTYKGVVGIQNVMNAYKISWNPDLPEVIEFKNGLAVHEIETDVSIGFISDRSRHDGCFIVMGIIEEVILEENWWYFACSCMKALSFDLVKEDQGVAMGIDFHDDGGLPMAVATRFRLVDWEPRIVEAMITLLPVEQARDLLFTHV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi43g00015 347 CDD RPA1_DBD_B_like 138 233 - -
Sebi43g00015 347 SUPERFAMILY Nucleic acid-binding proteins 119 237 IPR012340 -
Sebi43g00015 347 Gene3D - 7 110 IPR012340 -
Sebi43g00015 347 CDD RPA1_DBD_A_like 22 104 - -
Sebi43g00015 347 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
Sebi43g00015 347 Gene3D - 112 243 IPR012340 -
Sebi43g00015 347 Pfam Domain of unknown function DUF223 53 128 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi43g00015 Sebi-Chr43 307405 309720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi43g00015 67 233 Core DNA Replication Machinery Family AT2G06510 27.322 1.19e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi43g00015 - - lja:Lj6g3v0884310.1 226.098