Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi43g00012 ATGGCGACTATTGTGGCAGAAGCAATCCTCTCAGCTTCCGTGGAGTTGTTGATAGCCAAGATAATTTCCCCTGAGCTCAAGAACTTCTTTCGAAACAGGAAGATTGATGTGTCACTCCTGGACAAGCTGAAAACAACACTACTGACTCTTCAAGTTGTACTGAATGATGCTGAGGAGAAACAGATAAAAAATCCTGTTGTCAAGGAATGGCTGGATAAGCTGAGAGATGTTGTCTTTGAAGCTGATGATCTGTTTGACGAAATCAACACCGAGGCATTAAGATTCAAAGTGAAAGCCGAGTGTCAAGGCCACACTGCCAGTGCTAAGGTGCAAAACATCCTTTCTTCTACTTTCAAACAGTCTTGCAGGGGGATCAATTCTAAAATGCAACCTTTATTTGAAAGGTTAGAACACTTTGCACAGAAAGCACACCTTCTTGGATTGAAAGAAGGTGTTTCTAGCAGTGTTTGGCATGGAACTCCTACAAGTTCTGTGGTAGATGAATCTGTTATTTATGGCAGAGATGGTGACAGAAACAAACTTAAAGATTATTTGCTTTCAGAAGATAGAGACTATAAAATAGGAGTCATTTCCATTGTGGGCATGGGAGGGCTTGGTAAAACAACCCTTGCTAAACTTCTTTACAATGATTCAGATGTAAAGGAGAAATTTAATTTGAAAGCATGGGCACATATCTCAAAGGATTTTGATGTTATCAAGGTCACTAAAACCCTTCTTGAATCTGCCACTTCAGAAAAAACTAATACTGATGATAACTTGAATTCTCTACAAGTGAAATTGCAGCAGAGTTTAAGCCATACAAAATTTTTGCTTGTATTGGATGACATATGGGAAGGAAACTATATTGATTGGAACAATCTAATGGACATCTTTAATGCTGGGGTTATGGGAAGTAAAATCATCATCACCACACGAGATCAAAGTGTTGCATTAGCCATGCAAACCTTTCTTCCTATCCACTATTTGGAACCTCTGGAAAGTGAAGATTGTTGGTCATTACTTGCTAAACATGCATTTGGAGCAAGCAACTATCAACAACGGTCCAACTTAGAAGTGATTGGCAGAGAAATTGCCAACAAATGTGATGGCTTACCATTAGCTGCAGTAGCACTTGGGGGTCTTCTTCGCACCAAATTGTCGCAAGATGATTGGAATAAGGTATTAAAAAGTAACATTTGGGATTTGCCAAATGTTGAGGTGCAACCAGCTCTGCTCTTGAGCTATCATTATCTTCCAGCTCCTTTAAAACAATGCTTTTCCTATTGTTCAATTTTTCCGAAGAATTCCGAGTTAGACAAAAAGATGGTAGTTCAGTTGTGGATTGCAGAAGGCTTGGTACATGAGTGCAGAAGTCAGAAAAGTTGGGAAGAATTAGGAGAAGAATACTTTGATGAACTGGTGTCAAGGTGGCTCATACTTCGAAGGACTGTTGATGGGGAAGAAAGCTTTGTAATGCATGATCTCATCAATGATTTAGCTACAATGGCTTCATCTCCTTATTGTATCAGGTATACGTACCTTCCTACCCTTACCATTACAGCTAGACGGGTTGTTTCTTTTGTTCTCACCCTGTTACCTATCAAACAAGAGTTGCCCAACTCTATTGGAAATTTGAAATACCTACGGTACTTAAATCTCTCTTCCACTGGGATTAAAAAGTTGCCTTCAGTAATATGCAAGCTTTACAATCTGCAGACCTTATTGTTGTCAGACTGTTGGAAACTCATTGAATTGCCTGAGGACATGGGAAAATTGGTGAATCTATGCCACCTTGACATTAGTAACACCAAATTGAAGGAGTTGCCGACACAAATAACAAGATTACAAAATCTGCAAAGTTTGTCTAATTTTATTGTCAGCGAACAACATGATGGAGTGAAGGTTGCAGATCTGGGAAAATTTCCTCATCTACTGGGAAAGCTTTCCATCTCACAGCTACAAAATGTTGCCAACACCTCTGATGCTTCTCAAGCAAATTTGAAGATGAAAGAACAAATTGACGAGTTGGAACTAACATGGCATGAGAATGACTCTGATTTGCAAATTCAAAGTCTTGTATTTGAACAGTTGCGACCCTCAACAAATTTGAAGAGTCTCTCTATCAGAGGCTTTCATGGAACTAGTTTTCCAAATTGGTTGGGTGATTCTTCATTTGGAAACATGGTGTCTTTGAGCATAACTGATTGTCATCATTGTTCATGGCTGCCACCTCTTGGACAATTGCATAGCCTGAAAAAGCTCTCTATTTCTGTGATGAAATCTGTGAAGACTGTCGGTGCTAAATTCTATGGAAGTAGTACTCCTTCATGTCAACCATTTCCCTCTTTGGAGACTCTCTCTTTTAGGGATATGCCAGAGTGGGAGGAATGGAAGTTGATTGGAGGGCATTCAGATGATAATGATAATAGCAACACCAACATTATAAGGTCATCAGGTCTATTCCACCAATTGATGCTGCCTCTCCATTCTCTTCGGAAGTTAACGATATCCGACTCTCCCTCTCTGACTTCCTTCCCAAGAGACGGACTACCCAAAACCTTACAATCTCTCTATCTCTATGACTGTGACAATCTGGAATTCCTTCCCTGTGAATCCTTGCACAACTACACATCACTTGAGGAATTAACAATAGTTGATAGCTGTAATTCAATGACATCCTTTACCTTGGGCTCTCTCCCCGTGCTCAAAAGTCTTTGTCTCTCTCGTTGTGAAAATCTTAAATCGATTTTCATTGTAGAAGATGCATCCCAGAGTCTCTCCTTTCTTCAAAGTATCCAAATATATGACTGTGGTGAACTTGAGTCCTTTTCTCCGGGTGGATTGCCCACTCCTAACCTCATTTATTTCACGGTGTCTCGTTGTAAAAAGCTTCCTTCACTACCAGAACCAATGAATGCTTTCCCTGGCCTTCAAGAAATGGAAATTAGTGACCTTCCAAATCTGCAATCTTTTGCCAAAGAGGGTTTGCCTATCAATTTACGGCAACTAACTATCAGCGGGAACTATCAAGTTAGTGAGTGGAGTTTGGGACGTCTCACCTGTCTTACTGGGTTGCGACTTCAAGGTGATGATATCGTGAATGCGTTGATGAAAATGGAAGTGCCATTGCTACCGGCTTCAATTGTGTCCCTAACCCTCTCTAGTCTTGATGATATAGAATGCTTGGATGGGAAGTGGCTTCACCATCTCACCTCTCTCCAAACACTTGAGATTTCATTCTGTTTCAACCTCAAGTCGTTGCCAGAAGAGGGATTGCCTTCCTCTCTCCAAACTCTGGAGATCTATAACTGCCCATTACTGAAAGCAGCAAGTTGGCAGAGGAAGCGAGGGAAAGAGTGGGCTAAGATTGCTCGCATTCCCACCATAGTTATTGATAAGAAAATGATCACATGA 3414 0.406 MATIVAEAILSASVELLIAKIISPELKNFFRNRKIDVSLLDKLKTTLLTLQVVLNDAEEKQIKNPVVKEWLDKLRDVVFEADDLFDEINTEALRFKVKAECQGHTASAKVQNILSSTFKQSCRGINSKMQPLFERLEHFAQKAHLLGLKEGVSSSVWHGTPTSSVVDESVIYGRDGDRNKLKDYLLSEDRDYKIGVISIVGMGGLGKTTLAKLLYNDSDVKEKFNLKAWAHISKDFDVIKVTKTLLESATSEKTNTDDNLNSLQVKLQQSLSHTKFLLVLDDIWEGNYIDWNNLMDIFNAGVMGSKIIITTRDQSVALAMQTFLPIHYLEPLESEDCWSLLAKHAFGASNYQQRSNLEVIGREIANKCDGLPLAAVALGGLLRTKLSQDDWNKVLKSNIWDLPNVEVQPALLLSYHYLPAPLKQCFSYCSIFPKNSELDKKMVVQLWIAEGLVHECRSQKSWEELGEEYFDELVSRWLILRRTVDGEESFVMHDLINDLATMASSPYCIRYTYLPTLTITARRVVSFVLTLLPIKQELPNSIGNLKYLRYLNLSSTGIKKLPSVICKLYNLQTLLLSDCWKLIELPEDMGKLVNLCHLDISNTKLKELPTQITRLQNLQSLSNFIVSEQHDGVKVADLGKFPHLLGKLSISQLQNVANTSDASQANLKMKEQIDELELTWHENDSDLQIQSLVFEQLRPSTNLKSLSIRGFHGTSFPNWLGDSSFGNMVSLSITDCHHCSWLPPLGQLHSLKKLSISVMKSVKTVGAKFYGSSTPSCQPFPSLETLSFRDMPEWEEWKLIGGHSDDNDNSNTNIIRSSGLFHQLMLPLHSLRKLTISDSPSLTSFPRDGLPKTLQSLYLYDCDNLEFLPCESLHNYTSLEELTIVDSCNSMTSFTLGSLPVLKSLCLSRCENLKSIFIVEDASQSLSFLQSIQIYDCGELESFSPGGLPTPNLIYFTVSRCKKLPSLPEPMNAFPGLQEMEISDLPNLQSFAKEGLPINLRQLTISGNYQVSEWSLGRLTCLTGLRLQGDDIVNALMKMEVPLLPASIVSLTLSSLDDIECLDGKWLHHLTSLQTLEISFCFNLKSLPEEGLPSSLQTLEIYNCPLLKAASWQRKRGKEWAKIARIPTIVIDKKMIT 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi43g00012 1137 Gene3D Ribonuclease Inhibitor 521 629 IPR032675 -
Sebi43g00012 1137 Coils Coil 246 266 - -
Sebi43g00012 1137 Gene3D Ribonuclease Inhibitor 995 1117 IPR032675 -
Sebi43g00012 1137 Gene3D Ribonuclease Inhibitor 849 994 IPR032675 -
Sebi43g00012 1137 Gene3D Ribonuclease Inhibitor 636 848 IPR032675 -
Sebi43g00012 1137 Pfam Rx N-terminal domain 25 98 IPR041118 -
Sebi43g00012 1137 Gene3D - 30 138 - -
Sebi43g00012 1137 Coils Coil 40 60 - -
Sebi43g00012 1137 PRINTS Disease resistance protein signature 196 211 - -
Sebi43g00012 1137 PRINTS Disease resistance protein signature 897 913 - -
Sebi43g00012 1137 PRINTS Disease resistance protein signature 368 382 - -
Sebi43g00012 1137 PRINTS Disease resistance protein signature 270 284 - -
Sebi43g00012 1137 Gene3D - 158 324 IPR027417 -
Sebi43g00012 1137 SUPERFAMILY L domain-like 486 795 - -
Sebi43g00012 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 429 IPR027417 -
Sebi43g00012 1137 SUPERFAMILY L domain-like 827 1111 - -
Sebi43g00012 1137 PANTHER DISEASE RESISTANCE PROTEIN RP 40 799 IPR044974 GO:0006952
Sebi43g00012 1137 Gene3D - 414 502 IPR036388 -
Sebi43g00012 1137 Gene3D - 331 413 IPR042197 -
Sebi43g00012 1137 FunFam Probable disease resistance protein At1g63360 415 502 - -
Sebi43g00012 1137 FunFam Probable disease resistance protein At1g61300 159 323 - -
Sebi43g00012 1137 Pfam NB-ARC domain 179 396 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi43g00012 Sebi-Chr43 253649 257363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi43g00012 536 621 WRKY Transcription Factor Family AT4G12020 43.678 5.67e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi43g00012 - - tpra:123916222 1409.05