Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi439g00009 ATGTATCTATCTTCCATAGCTTCTCTGTTCCCCAAAACCCTAACTGCCATTCCTTTCCTTCACCGAACCCGAACTCATTCTCCAAAACTAAACGCTATTCGAACTATGAGTTCCGGGTCCACCCAGCGTATCTTCCAGCTCAAGCTCGACCCGCTAACCGGTACCTCTGAATGGGTAGTCATCGAAGAAGAAGACGACGAACAAAGCTTCACCGATAATTTCCACCAGCCTCTTCTCGCCACGACGTCGTATTTGGACATGCTCAATGACTCCGCCAGAAACAGAGCATTTCGCGAAGCCATTGAGAAAACCATCACCAAACCTTGCCATGTTCTTGATATCGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTGTGCGAGCTATGGGTGGCAAAGGGACGGTAACGGCGTGTGAGTCTTATCTTCCGATGGTGAAGTTGATGAAGAAGGTGCTGCGCCTTAATGGAATGGAAGGAAGAATCAAAGTCATCAACAAACGCTCTGATGAACTCAAACTTGGCCTTGATATCCCTTCACGTGCAGATGTTCTTCCTAGTGCCTTGATTCGTCTTTCAAACAAAGGAAAACTAAAATCATTATTGCAGGTAAGCGAGATACTAGATTCAGAATTACTTGGTGAGGGGCTTATACCTACCTTACAACATGCGCATGATAGTTTGTTGGTGGAAAACCCTCTCACTGTGCCATATCGAGCAACTACATATGGACAGCTGGTTGAAAGCAAATTCTTGTGGCAGCTGCATGATTTGCATAACAATGAGGCTGGTGCATCTGATGGCATTCGTCTTACCCCTCCGGGACTTGATAGTGTTTTAAGTGTCAAACGTCAGCAATATGCCATGCATTGTGATCCGATAGGAGAAGAAATAAAACCACTTTCAGAAACCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTAATGGAGAAACTGAGCTGTGCATAAAGGCAACTAATGATGGTAGAGTTCATGCTGTCATATCTTGGTGGGTACTCCAACTTGATCGTGAAGGGACAATCTATTATTCCACTGCTCCTAGATGGATAAACTCACCAACAATTAAAAGTGAGGGTCCTGTTGATTGGTGTGACCACTGGAAACAGGGTGTTTGGTTTGTTCCAGGCAGTGGCATTTCCACATTCAAAGGGGAAGAAATTCATTTACATGCTACTCATACTGATACTACTATATCATATAATTTATATTCGCAAGCACCAACTGCTAAGGTTGTACATCATGGGTTGAGGACTGGAGATTTGCAGCTTGTACTGCCACTAGAACGGGCTGCAATCTATGGAGACAGGGGATGGAGGCTTTCAATGTTGAAAGCACTAGAAAGTGTGGGGAGAGGTTGCTCATTATGCATGGTTGCAGATGATAGTGTGTTTTTACCTCTTCTTGTGGCACATCTTTCCGAAACACCACATATAATATCATTACTTCCGGGGCTAAAGGAAAGGGGTCTCCAATATTTGCAAGCTGCTGCCCAAGCAAATCGTTTGTCACCTAATCGCATAGAAGTTCTTGAAAAAAGGGTGAAACAGTTAACCATGAATGATACGAATCAGAAAAAGGTTGATCTGTTAATAGCAGAACCTTTCTATTTTGGACACGATGGCATGCTTCCATGGCAGAACCTGCGATTTTGGAAGGATCGTACGACACTTGATCATACCCTCTCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGGGCTTGTGCCATCTATCTTCCTGATCTTTGGAAAAGTCGTTGCTGCTTGAGTAAGATAGAAGGTTTTGACCATTCAGTGGTAAATGCCACATTGGGGGCCTGCGGTCATCTACCTGAATTGGAAGAGGGTCCTTGTCTGCCCTTTTCTGTCTGGCAATGTGGAGAATTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTTTCAAAACAAATATGCCAATGTCAAGGAAAATCCCAGGTTAAATTCACCAAGACTGGGGTTTGTCATGGGTTTGTACTATGGATTGACTGGGTGATGGATCTGCAAAATTCTGTTGTGATATCAACTGGTCCAGATAAGAGATATTGGAAGCAGGGAATAAAGCTTCTTGCAACACCTAAAACAGTAGGACCCCAAAGATCGAGAGATGTCCAAGCATGTTGTTCTGCAGTTCTTGAAGCATGTTTTAATCCGTTAAAGGGGGAACTCAAAATTATACTTGATTTCTTATGA 2253 0.4323 MYLSSIASLFPKTLTAIPFLHRTRTHSPKLNAIRTMSSGSTQRIFQLKLDPLTGTSEWVVIEEEDDEQSFTDNFHQPLLATTSYLDMLNDSARNRAFREAIEKTITKPCHVLDIGAGTGLLSMMAVRAMGGKGTVTACESYLPMVKLMKKVLRLNGMEGRIKVINKRSDELKLGLDIPSRADVLPSALIRLSNKGKLKSLLQVSEILDSELLGEGLIPTLQHAHDSLLVENPLTVPYRATTYGQLVESKFLWQLHDLHNNEAGASDGIRLTPPGLDSVLSVKRQQYAMHCDPIGEEIKPLSETFKIFEFDFWKRPESNGETELCIKATNDGRVHAVISWWVLQLDREGTIYYSTAPRWINSPTIKSEGPVDWCDHWKQGVWFVPGSGISTFKGEEIHLHATHTDTTISYNLYSQAPTAKVVHHGLRTGDLQLVLPLERAAIYGDRGWRLSMLKALESVGRGCSLCMVADDSVFLPLLVAHLSETPHIISLLPGLKERGLQYLQAAAQANRLSPNRIEVLEKRVKQLTMNDTNQKKVDLLIAEPFYFGHDGMLPWQNLRFWKDRTTLDHTLSEDALIIPSKGILRACAIYLPDLWKSRCCLSKIEGFDHSVVNATLGACGHLPELEEGPCLPFSVWQCGEFDVLSETFDVMEFDFSKQICQCQGKSQVKFTKTGVCHGFVLWIDWVMDLQNSVVISTGPDKRYWKQGIKLLATPKTVGPQRSRDVQACCSAVLEACFNPLKGELKIILDFL 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi439g00009 750 Gene3D - 582 749 - -
Sebi439g00009 750 FunFam Protein arginine N-methyltransferase 7 430 578 - -
Sebi439g00009 750 FunFam Protein arginine N-methyltransferase 77 237 - -
Sebi439g00009 750 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 418 750 IPR025799 GO:0016274|GO:0018216
Sebi439g00009 750 FunFam Protein arginine N-methyltransferase 1.6 582 749 - -
Sebi439g00009 750 Gene3D Vaccinia Virus protein VP39 77 237 IPR029063 -
Sebi439g00009 750 Gene3D Vaccinia Virus protein VP39 432 578 IPR029063 -
Sebi439g00009 750 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 501 719 IPR025799 GO:0016274|GO:0018216
Sebi439g00009 750 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 63 412 IPR025799 GO:0016274|GO:0018216
Sebi439g00009 750 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 409 IPR029063 -
Sebi439g00009 750 FunFam Protein arginine N-methyltransferase 1.6 238 426 - -
Sebi439g00009 750 Gene3D - 238 425 - -
Sebi439g00009 750 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 499 718 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi439g00009 Sebi-Chr439 170848 175680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi439g00009 86 242 C2H2 Transcription Factor Family AT3G12270 28.916 3.24e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi439g00009 K11438 - gmx:100785846 1235.71