Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi439g00001 ATGGCTCCTCTCTTCTTCATCTCGCTGCAATTAATTTCCACTTGCATATTACATGCAGCCACTGTGACATGCACGACCTACCACGACAGCACCCCCAAAATAGTCTCTTCCACAAACACATCCAAATTACACAATCTCCGTTGGGTTGGACCCATTGGACACCGAGTAATCACCGTCGACATCAATGGCGGTGGCCATTTCCGTTCCGTTCAAGCCGCCGTCAATGTCGTCCCTGACAACAATAGAATGAATGTCCTTATTCAAATTAGCGCCGGATGCTACATAGAGAAGGTGATGGTGCCGGTGAGTAAACCGTACATAACGTTTCAAGGGGCGGGAAGGGAAGTGACGGTTATAGAATGGCATGATCGAGCGAGTGACCCTGGTCCTAACGGACAACAGCTGCGTACTTACAGAACTGCTTCTGTAACTGTTTTTGCCAACTATTTCTCTGCTAGGAATATCACCTTCGAGAATACAGCGCCAGCACCAATGCCGGGAATGCAGGGATGGCAAGCGGCGGCGTTTCGGATATCAGGAGACAAAGCTTACTTCTCTGGCTGCGGATTCTACGGTGCACAAGACACTCTTTGTGACGACGCTGGCCGCCATTATTTCAAGGAATGTTACATTCAGGGTTCCATAGATTTCATTTTTGGGAATGGAAGGTCCATGTACAAG 681 0.486 MAPLFFISLQLISTCILHAATVTCTTYHDSTPKIVSSTNTSKLHNLRWVGPIGHRVITVDINGGGHFRSVQAAVNVVPDNNRMNVLIQISAGCYIEKVMVPVSKPYITFQGAGREVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNITFENTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIQGSIDFIFGNGRSMYK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi439g00001 227 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 53 227 - -
Sebi439g00001 227 Pfam Pectinesterase 57 225 IPR000070 GO:0030599|GO:0042545
Sebi439g00001 227 Gene3D - 12 227 IPR012334 -
Sebi439g00001 227 SUPERFAMILY Pectin lyase-like 54 226 IPR011050 -
Sebi439g00001 227 ProSitePatterns Pectinesterase signature 2. 211 220 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi439g00001 Sebi-Chr439 751 1697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi439g00001 4 227 Carbohydrate Esterase AT5G47500 66.071 9.24e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi439g00001 - - gmx:100796327 400.593