Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi438g00058 | ATGGAAAGCAAGACTGAAACTCACATGACATCGGCTGTGGCCTTTGTTGAAGGGGGCATTCAAGAATCCTGTGATGATGCTTGCAGTATATGCCTTGAGGAGTTTTGTGAAAGTGATCCTTCAACGGTCACAACTTGTAGGCATGAGTTTCACCTGCAGTGCATTCTTGAATGGGGTCAGAGAAGCTCCCAGTGTCCTATGTGTTGGCAATCTATTAGCTTGAAGGATCCTACCAGTCAGGAATTGTTTGAGGCGGTAGAGCAGGAGAGGAAGCTGAGGGTTACTCCATCAAGGAATGCTGCTATTTTTCGTCACCCTGCCCTTGGTGATTTTGATTTGCAGCAACTACGCATGAGTGTCAATGATGCTGATCTTGAAGAGCGAATAATCCAACATTTAGCTGCTGCTGCAGCAATGGGGAGAGCCAACCACCTTGTTCGGAGGGAAGTGCAGCGAACTCGGTCATCTGCTCATGGTCATCCACATTTCTTAGTATTCTCAACTCAGCCTTTTGCACCTTCATTAAGTCCTGATTCAGCTGCTGAAAAGGGGAAATGA | 558 | 0.4677 | MESKTETHMTSAVAFVEGGIQESCDDACSICLEEFCESDPSTVTTCRHEFHLQCILEWGQRSSQCPMCWQSISLKDPTSQELFEAVEQERKLRVTPSRNAAIFRHPALGDFDLQQLRMSVNDADLEERIIQHLAAAAAMGRANHLVRREVQRTRSSAHGHPHFLVFSTQPFAPSLSPDSAAEKGK | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi438g00058 | 185 | ProSiteProfiles | Zinc finger RING-type profile. | 28 | 68 | IPR001841 | - | |
Sebi438g00058 | 185 | FunFam | E3 ubiquitin-protein ligase RHF2A | 1 | 102 | - | - | |
Sebi438g00058 | 185 | Pfam | Ring finger domain | 27 | 68 | IPR001841 | - | |
Sebi438g00058 | 185 | SUPERFAMILY | RING/U-box | 20 | 76 | - | - | |
Sebi438g00058 | 185 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 4 | 78 | IPR013083 | - | |
Sebi438g00058 | 185 | SMART | ring_2 | 28 | 68 | IPR001841 | - | |
Sebi438g00058 | 185 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 12 | 77 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi438g00058 | Sebi-Chr438 | 744695 | 746747 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi438g00058 | 25 | 70 | C3H Transcription Factor Family | AT5G15790 | 50.000 | 5.30e-12 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi438g00058 | K19043 | - | gmx:100800419 | 301.212 |