Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi438g00029 ATGCATTTTCATGACTGTTTTGTCAGGGGGTGTGATGGGTCGGTTTTGTTGGAGTCCACTGCCAATAACACTGCAGAGAAGGATGCCATTCCTAATTTATCTTTGTCTGGCTTTGATGTTATAGAAGACATAAAAGAAGCACTGGAGGCTAAATGTCCCGGAATTGTATCTTGTGCTGATATACTAACTTTGGCAGCTAGGGACTCTGTTTCTGTCCAATTTAATAAGCCTATGTGGGAAGTGCTTACCGGTAGAAGAGATGGCACAGCATCTAAAAGTAGTGAAGTTCTGGCCAATATCCCAGCACCTTTCTTTAACTTTGCCCTGCTCAAACAAAGTTTTGCTAATAAAGGGCTTACTTTGCACGACCTTGTTGTATTATCAGGGCATTGCAATTTGTTCAGTAACAGGCTTTTCAACTTCAGTGGAAAAGGTGATCAAGATCCTTCTTTGAATCCCAGTTATGCCAATTTCTTAAAGAGTAAATGCAAGAGCCTGAGTGACACCACCACAACAGTAGAGATGGATCCTAATAGCTCTGAAAGCTTTGACAGTGACTATTATTCAATCCTTCTCCAGAACAAGGGTTTGTTCCAATCAGATGCTGCCCTTCTAACAACCAAGCAATCTAAGAACATTGTTAACGAATTGGTTAGACAAAACAAATTCTTCACAGAATTTGCACAGTCAATGAAGAGGATGGGAGCCATTGAGGTCCTCTCAGGCTCTGCTGGGGAAATTAGGAGGAAGTGCTCTGTTGTCAACTCTTAA 771 0.415 MHFHDCFVRGCDGSVLLESTANNTAEKDAIPNLSLSGFDVIEDIKEALEAKCPGIVSCADILTLAARDSVSVQFNKPMWEVLTGRRDGTASKSSEVLANIPAPFFNFALLKQSFANKGLTLHDLVVLSGHCNLFSNRLFNFSGKGDQDPSLNPSYANFLKSKCKSLSDTTTTVEMDPNSSESFDSDYYSILLQNKGLFQSDAALLTTKQSKNIVNELVRQNKFFTEFAQSMKRMGAIEVLSGSAGEIRRKCSVVNS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi438g00029 256 ProSiteProfiles Plant heme peroxidase family profile. 1 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 Pfam Peroxidase 1 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 CDD secretory_peroxidase 1 254 IPR033905 GO:0004601|GO:0042744
Sebi438g00029 256 PRINTS Plant peroxidase signature 36 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PRINTS Plant peroxidase signature 174 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PRINTS Plant peroxidase signature 122 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PRINTS Plant peroxidase signature 55 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PRINTS Plant peroxidase signature 75 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PRINTS Plant peroxidase signature 229 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PRINTS Plant peroxidase signature 190 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PANTHER PEROXIDASE 25-RELATED 1 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 Gene3D Peroxidase, domain 2 101 234 - -
Sebi438g00029 256 Gene3D - 1 255 - -
Sebi438g00029 256 SUPERFAMILY Heme-dependent peroxidases 1 255 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 FunFam Peroxidase 9 105 - -
Sebi438g00029 256 FunFam Peroxidase 101 234 - -
Sebi438g00029 256 PRINTS Haem peroxidase superfamily signature 75 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PRINTS Haem peroxidase superfamily signature 56 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi438g00029 256 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi438g00029 Sebi-Chr438 341073 342288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi438g00029 1 256 Peroxidase AT1G05260 56.015 2.79e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi438g00029 K00430 - gmx:100775970 447.973