Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi437g00021 ATGGATGACTCAAATGGCCAAGATAATGTTGAAGATGTCTTAGAAGAAGTTATGGTTGAAGGTGTGCGAATAGACGGTGAGGATGACTTTGTGGACATTGATTTTTCGACGATCACTGAAGATGATGTGTTGAACTTCCACTTCCCTGACATGGATGTTGCATTTGCGTTTTATAATAAGTTTGCAATGTTGAAGGGTTTCTATGCAAGAAAAGCCAAGGAGAGAAAAAATAAGAACAATGAAATTGTGGAGAAGTCCTTTTTTTGTCACAAAGAAGGCAAGAGACGAAGAAGGAAGGGCGTGAAAGGAGTGCGGGCACAAAAGCCAGAGACAAGATGTTTTTGTAAGGCTAGTATGAAGATTCGTGTTAATAAACAAACTGGTCGCTGGCATGTGACTTATTTCTCAGATGATCATACCCATAAGTTGTTGGACCCTAAGTATAGTAGGATGTTGCCAACCCATAGGAGAATGAATGATGCGGACATAATGCAGATGAACAACATGCGAAAGGCTGGAATTAGCGCTCCCCAAATATATAGCTCATTTGCTTGTCAGGCAGGTGGTTTTGAACATGTTGGTTTCAGCAAGAGGGACATGTATAACCAAATAGTGAAGCAAAGGCAATTTCATCCTTCTGATGCTAAGACTGCTATTAAATTCCTACGTGGGTTGAAAGCTGCTGATGAAGAAATGTTTTGGAGTCACACGGTCGATGATGAAGGCAAGAGTCCCGCGGCAGTAATTACCGATGGAGATGTTGCTATGGGGAATTCCATAAGAAGAGTTTTTCCAAATATGACTCATAGATTATGTGCATGGCACCTCTTACGCAATGCTGCCAGCAATGTCAAAAATCTAAAAATGGTATTAGAATTTAGAAAATGCATGTTGGGTGATTATGAGCTTCACCAGTTTCATCGAAGGTGGGATAAGATGGTCAAAGCTTTTAGTCTTGAGGACAATACCTGGGTGAAAGATACTTATGAAAAACGGAAGATGTGGGCAACGACATACTTAAGGGGTAACTTCTTTGCTGGATTCAGGACCACCTCTCGGTGTGAGGGGTTACATTCGCACCTGGGGAAGTTTGTTCATTCTCGAAATGATTTGGCTGACTTTTTGGAGAACTTTCGCCGCTGTTTGGAATCTTTTCATTACAGGGAATTAGAGGCTGACTTCACCTCTGTTCATGGTGAACCAGTTATGCAAACAAATATTCAATCATTAGAGAGGTCTGCCTGTAAAGTGTTCATAAGGGAGGTGTTCATTGTGCTTGTACATCTCAACATTGAAGAGATGCCACAATGTCTTGTGTTGGAAAGGTGGACAATGGCAATTAAAGAAAATATTCGCAGTTTCAATGGAGATCATAGCACTTTGTTGGATTCTGTCTATATGGCTAGATGTGGGGCATTGGACTGGTTGTGCAAGCTCATGACTAGATCATGTGCTAGGTCAACCTATAAATTTAATGTCACAAGGGAGTTGGTTACTAAACATTTACAATGGTTGGATGAAACTAATGAAGCTAATGTTGAAAATAATAGTAAAGTTGATGACAGTGATATTTTTAGGGACCCGGTTAGAGTTGGCTCAAAAGGATGTGTTGTTGCTTCATCTTCAAGACCAACAAAGTCAAGGAAGCGTCAAAGGTGTAGGGTTTGTGGAGAGGCTGGACATAACCGAACGACGTGCTCTATGAACAGGAATGCCTCATATGCTACTCGAAAAGAATCATGTGATGTCTTTGAAATGACTGGTATAAATGAGGAAGGCCCTGGTGAAAGGAGATCTGAAACCAATGATGATATTCCACGTTCAGGCGAAGTTTGA 1836 0.4096 MDDSNGQDNVEDVLEEVMVEGVRIDGEDDFVDIDFSTITEDDVLNFHFPDMDVAFAFYNKFAMLKGFYARKAKERKNKNNEIVEKSFFCHKEGKRRRRKGVKGVRAQKPETRCFCKASMKIRVNKQTGRWHVTYFSDDHTHKLLDPKYSRMLPTHRRMNDADIMQMNNMRKAGISAPQIYSSFACQAGGFEHVGFSKRDMYNQIVKQRQFHPSDAKTAIKFLRGLKAADEEMFWSHTVDDEGKSPAAVITDGDVAMGNSIRRVFPNMTHRLCAWHLLRNAASNVKNLKMVLEFRKCMLGDYELHQFHRRWDKMVKAFSLEDNTWVKDTYEKRKMWATTYLRGNFFAGFRTTSRCEGLHSHLGKFVHSRNDLADFLENFRRCLESFHYRELEADFTSVHGEPVMQTNIQSLERSACKVFIREVFIVLVHLNIEEMPQCLVLERWTMAIKENIRSFNGDHSTLLDSVYMARCGALDWLCKLMTRSCARSTYKFNVTRELVTKHLQWLDETNEANVENNSKVDDSDIFRDPVRVGSKGCVVASSSRPTKSRKRQRCRVCGEAGHNRTTCSMNRNASYATRKESCDVFEMTGINEEGPGERRSETNDDIPRSGEV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi437g00021 611 Pfam FAR1 DNA-binding domain 57 144 IPR004330 -
Sebi437g00021 611 Pfam MULE transposase domain 241 279 IPR018289 -
Sebi437g00021 611 PANTHER OS01G0519700 PROTEIN 40 243 - -
Sebi437g00021 611 MobiDBLite consensus disorder prediction 587 611 - -
Sebi437g00021 611 MobiDBLite consensus disorder prediction 591 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi437g00021 Sebi-Chr437 448279 450903 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi437g00021 FAR1 7.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi437g00021 - - tpra:123896136 368.237