Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi437g00018 ATGGCTCTCGTTCTTCATGCGAGGAATAACAATAAAAATGCTTTCAAAGCCCTTATCGCTGCAGAATATAGTGGCGTTCAGGTTGAATTGGTGAACAACTTTGAGATGGGTGTTTCCAATAAAACTCCAGAGTTTCTCAAGATGAACCCCATTGGAAAGGTTCCTGTACTAGAAACGCCTGATGGTCCTGTTTTTGAAAGCAATGCCATTGCACGATATGTTACTCGCTTAAAGGCTGATAATCCTCTTTATGGATCCTCACTAATTGAATATGCCCGTATTGAGCAATGGATTGATTTCGCTACAATGGAGATAGATGCTAATATTTTGCGATGGTACATACCTCGTGCTGGTTTTGCTGTGTACCTTCCTCCGGCGGAGGAAGCAGCAATTTCTGCATTGAAGAGGGCACTGGATGCTTTGAACACACATCTTGCTTCCAACACATACCTTGTTGGACACTCTGTTACATTGGCTGATATCATTATGACATGTAACTTACTTTTGGGATTTAACCGATTAATGACCAAGGGTTTTACTTCTGAGTTCCCTCATGTTGAGAGGTACTTCTGGACCATGGTTAATCAACCAAATTTCCGGAAGATACTTGGTGAGATGAAGCAAACAGATTCTGTCCCACCTATTCAGTCTATCAAAAAACCTTCACAGCCAAAAGAGCCTGTGAAACCAAAGGCAAAGGATGAAGCAAAGAAAGAGGCTAAAAAAGAAGTAAAAAAGGAAGCAGAACCCAAAGAAGAGACTGGTGAGGAAGATGTGGCACCAAAGTCCAAGCCAAAGAATCCCCTTGATCTGTTGCCTCCTAGCAAAATGATTCTGGATGAATGGAAAAGGTTATACTCGAACACAAAAACAAACTTCCGTGAAGTCGCAATTAAAGGGTTTTGGGACATGTACGATCCCGAGGGATACTCTCTTTGGTTCTGTGATTACAGATACAATGATGAGAACACAGTGTCATTTGTGACTTTGAATAAGGTGAGTGGTTTTCTGCAACGAATGGATTTGGCTCGGAAGTATGCTTTTGGGAAGATGCTAATAATTGGCTCAGAGCCACCATTCAAAGTGAAGGGCTTGTGGCTTTTCCGTGGAACAGAGATTCCACAATTTGTGATTGATGAGTGCTATGACATGGAGTTATATGAGTGGACAAAAGTTGATATCACAGATGATGCTCAAAAAGAGCGTGTCAATCAGATGATTGAAGACCATGAGCCTTTTGAAAGTGAAGCTTTACTGGATGCCAAGTGCTTCAAGTGA 1278 0.4163 MALVLHARNNNKNAFKALIAAEYSGVQVELVNNFEMGVSNKTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVTRLKADNPLYGSSLIEYARIEQWIDFATMEIDANILRWYIPRAGFAVYLPPAEEAAISALKRALDALNTHLASNTYLVGHSVTLADIIMTCNLLLGFNRLMTKGFTSEFPHVERYFWTMVNQPNFRKILGEMKQTDSVPPIQSIKKPSQPKEPVKPKAKDEAKKEAKKEVKKEAEPKEETGEEDVAPKSKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYRYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGTEIPQFVIDECYDMELYEWTKVDITDDAQKERVNQMIEDHEPFESEALLDAKCFK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi437g00018 425 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 265 425 IPR001662 GO:0003746|GO:0006414
Sebi437g00018 425 FunFam Elongation factor 1 gamma 80 216 - -
Sebi437g00018 425 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 425 IPR044628 GO:0004364
Sebi437g00018 425 Gene3D - 80 213 - -
Sebi437g00018 425 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Sebi437g00018 425 CDD GST_C_EF1Bgamma_like 90 210 - -
Sebi437g00018 425 MobiDBLite consensus disorder prediction 210 271 - -
Sebi437g00018 425 MobiDBLite consensus disorder prediction 224 264 - -
Sebi437g00018 425 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 265 425 IPR036433 GO:0003746|GO:0006414
Sebi437g00018 425 SFLD Main (cytGST) 4 193 - -
Sebi437g00018 425 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Sebi437g00018 425 Pfam Elongation factor 1 gamma, conserved domain 264 372 IPR001662 GO:0003746|GO:0006414
Sebi437g00018 425 Pfam Glutathione S-transferase, C-terminal domain 128 197 IPR004046 -
Sebi437g00018 425 Gene3D Glutaredoxin 1 74 - -
Sebi437g00018 425 Pfam Glutathione S-transferase, N-terminal domain 11 75 IPR004045 -
Sebi437g00018 425 SFLD Glutathione Transferase (cytosolic) 4 193 IPR040079 -
Sebi437g00018 425 SUPERFAMILY GST C-terminal domain-like 80 213 IPR036282 -
Sebi437g00018 425 SUPERFAMILY eEF1-gamma domain 265 425 IPR036433 GO:0003746|GO:0006414
Sebi437g00018 425 SMART EF1G_2 264 372 IPR001662 GO:0003746|GO:0006414
Sebi437g00018 425 FunFam Elongation factor 1-gamma 1 265 425 - -
Sebi437g00018 425 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Sebi437g00018 425 CDD GST_N_EF1Bgamma 3 77 - -
Sebi437g00018 425 FunFam Elongation factor 1B gamma 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi437g00018 Sebi-Chr437 375890 378962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi437g00018 1 425 Eukaryotic Initiation Factors Gene Family AT1G57720 73.412 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi437g00018 K03233 - vvi:100246571 727.628