Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi437g00013 ATGACTGTAGAGGAAGCTTCCCGTGATAGCAGACCAAAAGGTAAGAAAGGTAACCGTGGAAGGCTGAGGAAGAAGTACCAGTCATTATACTCAGATGATGACGGCTCTTTAGAACAAAAGATAATTGTCAATGACAGTGTGGATGACCAATCCAAGGAAATTGATAATGAAGATGGCCTACCAATTTCATCTCTTTACAAGAATAAAACCTCTCAAAGGGCCTTGTTTGAGGAAAGTGATGATAACATTGACAGAGGAGCAGATGATGCTGGCAACATGAATGGTGAAGATGATAGAAATAGTAATACTGAAACAAATTTAAAAACTGATGATGTTTTTGTAGATTGCCAGATGCAGAGGGAAGCTGAACTGTCTGACCACTTGGTAGATCCTTCCACCCTCATGGATGTTGAGAATGTTAAAAAATTAAAAAAGAAAAAGAAGGGAAAGGGAAAAGAAACAAAGAGTCCGTCTAATGACCAGTCTATCAAACTAAATAATGCTGTGCAAGATGAGCCAAAAATGGACAAGATGACCCAGGGTTTTCTGGAAGTAAATGAACACCAGCAACAGCATGCTGATGATAAGGAAACTGAAATCACGGATAAAATCCTACCTTTCTCTGAGGTTGGTCAAGGACAGGGCAAAAAAACAAAGAAAAGGAAAGAACTATCAAAGGAGGGGACAATTTCTAATGATGCTTATCATAGCAATCCATCTAATCTGCCCCAGAGAGATGAACACAATAAACAGGACACAGTTAATGAGGATGTTAAGATTTCAGACAATGTTGCATTGCCTTCTGCTGAAATGGATCCTGACAAGAGGAAAAAGAGGAGAAAGAAAGAACATGGAAACAAAGCGTCGCATCTTGAAGGTGACAATGGATACCATGAAGATGTCATCCAAGATAACAAAGCCAATGGAGATACTGCAGAGTCTGATAATCTGAATCATATATTTTCTGAAGGAAAAGAGCAGCATCATAAGCTAGCAAATGAAAAGAGTGTGGATGATGGTGCTCATGACATTCCTGTTGGAAATCAATCTGAGGATAGAAAAATTAAGAAAAAGAAGAAAAAGATAAAAAGTCAGGGCAATGGGGAAGTTGTAAATAAGGCGGAAGGTGCAGAGCCTTCACAAGTTATAAAATTGTCAAATGGGCTAATTATTGAACAGCTCGAGTCGGGGACAAAAGATGGCAAAATTGCTGCATTAGGGAAAAAGATCAGCATCCAGTACACTGGCAAGTTGAAGGAAAATGGAGTAGTATTTGAGTCAAATGCTGGACAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTGAGGGTTGGGATGTTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGAAGACTTGTAATTCCTCCATCAATGGCGTCGAAGGGTGATGGACACAGTGATAGTGCCAAAATACCACCAGATTCATGGTTGGTTTATGATTTTGAACTGGTTAAAGTTCATTGA 1494 0.3942 MTVEEASRDSRPKGKKGNRGRLRKKYQSLYSDDDGSLEQKIIVNDSVDDQSKEIDNEDGLPISSLYKNKTSQRALFEESDDNIDRGADDAGNMNGEDDRNSNTETNLKTDDVFVDCQMQREAELSDHLVDPSTLMDVENVKKLKKKKKGKGKETKSPSNDQSIKLNNAVQDEPKMDKMTQGFLEVNEHQQQHADDKETEITDKILPFSEVGQGQGKKTKKRKELSKEGTISNDAYHSNPSNLPQRDEHNKQDTVNEDVKISDNVALPSAEMDPDKRKKRRKKEHGNKASHLEGDNGYHEDVIQDNKANGDTAESDNLNHIFSEGKEQHHKLANEKSVDDGAHDIPVGNQSEDRKIKKKKKKIKSQGNGEVVNKAEGAEPSQVIKLSNGLIIEQLESGTKDGKIAALGKKISIQYTGKLKENGVVFESNAGQAPFKFRLGKGEVIEGWDVGLEGMQVGEKRRLVIPPSMASKGDGHSDSAKIPPDSWLVYDFELVKVH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi437g00013 497 Gene3D - 348 497 IPR046357 GO:0003755
Sebi437g00013 497 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 407 497 IPR001179 GO:0003755
Sebi437g00013 497 MobiDBLite consensus disorder prediction 188 203 - -
Sebi437g00013 497 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 132 496 - -
Sebi437g00013 497 MobiDBLite consensus disorder prediction 214 229 - -
Sebi437g00013 497 MobiDBLite consensus disorder prediction 70 110 - -
Sebi437g00013 497 MobiDBLite consensus disorder prediction 73 105 - -
Sebi437g00013 497 MobiDBLite consensus disorder prediction 1 36 - -
Sebi437g00013 497 MobiDBLite consensus disorder prediction 286 306 - -
Sebi437g00013 497 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 404 494 IPR001179 GO:0003755
Sebi437g00013 497 MobiDBLite consensus disorder prediction 319 353 - -
Sebi437g00013 497 MobiDBLite consensus disorder prediction 243 257 - -
Sebi437g00013 497 MobiDBLite consensus disorder prediction 123 373 - -
Sebi437g00013 497 SUPERFAMILY FKBP-like 375 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi437g00013 Sebi-Chr437 199062 204126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi437g00013 407 494 Calmodulin-binding Proteins AT5G48570 40.449 4.13e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi437g00013 K14826 - gmx:100798135 426.402