Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi436g00003 ATGTCTCTTTCAAGACCAATTGAGGGCCGTAAACTTCAGCAATTGATGAAGGAAGGAGGAGCAGCAACGGGAGCACCCTCTTCATGGAATAGGCTCAGCAGCAACCACAGAAACTCTTTCCCTCCTTTACCTCCACACACCAGAAGCAAACTTGAAGATAGCGATGAAGATATGTTCACAGTTCCGGATGTGGAAGCAACACCAAGTAGTAACGTTAATCAAAGCAATGTGACGGATCCTCAGCTTCAAACTGCAGGTGGCATCGCCGGAAAGCGCCGCCGCGGAAAAAATCCAGTAGACAAGGAGTATAGACGCCTCAAGAGGCTGCTGAGGAACAGGGTTTCTGCCCAACAAGCCCGTGAAAGGAAAAAGGTATACGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGGAAGACAAGAATTCCAAGTTAGAAGAGTGTATCTCGACTTTGATCAATGAGAACACCATGCTCCGCAAGGTTCTTATGAACACGAGGCCCAAAGTTGATGAGAGCACTGAAGCATAG 528 0.4716 MSLSRPIEGRKLQQLMKEGGAATGAPSSWNRLSSNHRNSFPPLPPHTRSKLEDSDEDMFTVPDVEATPSSNVNQSNVTDPQLQTAGGIAGKRRRGKNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDKNSKLEECISTLINENTMLRKVLMNTRPKVDESTEA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi436g00003 175 Coils Coil 120 154 - -
Sebi436g00003 175 CDD bZIP_HY5-like 114 155 - -
Sebi436g00003 175 FunFam Transcription factor HY5 123 164 - -
Sebi436g00003 175 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 22 172 IPR044280 GO:0000981|GO:0045944
Sebi436g00003 175 MobiDBLite consensus disorder prediction 26 42 - -
Sebi436g00003 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Sebi436g00003 175 Gene3D Single helix bin 123 164 - -
Sebi436g00003 175 MobiDBLite consensus disorder prediction 16 104 - -
Sebi436g00003 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Sebi436g00003 175 SUPERFAMILY Leucine zipper domain 103 163 IPR046347 GO:0003700|GO:0006355
Sebi436g00003 175 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Sebi436g00003 175 MobiDBLite consensus disorder prediction 64 83 - -
Sebi436g00003 175 Pfam bZIP transcription factor 101 160 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi436g00003 Sebi-Chr436 45706 52203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi436g00003 77 172 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 73.469 1.21e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi436g00003 bZIP_1 2.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi436g00003 K16241 - gmx:100783826 224.557