Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi435g00038 CAACCTTATATACCTGACTACAGCAATGCAGTGGTGAACATTGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAACCAAGTTACATGAATGTAAGTCTGGAATTTGTTCTTTCATTCTCCTTTGTTAGGACCCGGGATTCTACTCAAGGACCTCTTCTGAATGCAATGGAAATAAGCAAATATGTACAAATTGCTTCAAAGACTGACAGGCAAGATTCAAATTTTGTAAATGCATTTGGCTCCTTGTCTGCTGATGTTGTCCTGAAGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGGTTAATTGTAGTACTACTACACCTCCAAGAATTACAAAGATAAACCTGTCAAGAAGGAATGTGAAGGGTGAAATCCCACGTGAGCTCAACAACATGGAAGGATTGACAGAATTGTGGTTAGATGGCAACTTGCTTACAGGACAACTACCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGACTGGTCCACTACCATCTTACTTGGGTAGCTTGCCAAGTTTACAAGCACTGTTCATACAGAATAACTCATTTACTGGGGAAATACCAGCAGGATTAGTATCTGGAAAAATCATTTTCAACTATGATGATAATCCTGGACTGCATAGAGGGAACAAAAAGCATTTTCAGTTGATGCTAGGAATTTCCATTGGAGTACTAGTGATTCTATTAATATTGTTCTTAGCAAGTTTAGTGCTATTGTGTAATCTGCGGAGAAAGGCATCTCAACAGAAACATGATGAAAAAGGTATATCAGGACGCAGCACTAAACCTTTAACTGGATATTCATTTGGTCCGGGTGGGAGTTTGATGGATGAAGGTACTGCATACTATATTACACTCTCAGAATTGAAAGAAGCTACTAATAATTTTTCAAAGAAAATTGGCAAAGGAAGTTTTGGATCTGTCTATTATGGGAAAATGAGAGATGGAAAAGAGGTGGCAGTTAAGACTATGACTGATCCATCCAGCCATGGGAATCAGCAATTTGTAAATGAGGTAGCTCTCCTTTCAAGAATTCATCACAGAAACTTGGTTCCTCTAATTGGATATTGTGAAGAAGAATATCAACATATTTTGGTTTATGAGTACATGCACAATGGCACTTTACGGGATCACATTCATGGTCACATTCAAGATTGTTCGAATCCGAAGCCATTAGACTGGCTAGCTCGTCTTCGAATTGCAGAAGATGCTGCTAAAGATTTTTTCCCCTTCTGGAACAGGTATTATGCAAATCAGCAATTGACTGAAAAGAGTGATGTGTACAGTTTTGGAGTTGTTCTGTTGGAACTGATATCAGGAAGAAAGCCTGTGTCATCAGAAGATTATGGTCCTGAAATGAATATCGTTCATTGGGCAAGATCCTTAATTCGGAAAGGAGATGTGATAAGCATCATGGATCCATCCCTAGTTGGGAATGTCAAAACTGAGTCAATTTGGAGGGTTGCTGAAATTGCCATGCAATGTGTAGAACAACATGGTGTCTCTAGGCCAAGGATGCAAGAAGTCATCTTGGCTATACAAGATGCTTCTAAGATTGAAAAAGGAATAGAAAACCAGCTAAAGTTGTCATCTTCAGGTAGTTCAAAACCATATTCCTCAAGGAAAACTTTACTTACAAGCTTTCTTGAAATTGAGAGCCCTGACTTGTCAAATGGTTGCCTTCCATCAGCAAGATAA 1734 0.3904 QPYIPDYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVRTRDSTQGPLLNAMEISKYVQIASKTDRQDSNFVNAFGSLSADVVLKNEGDPCVPTPWEWVNCSTTTPPRITKINLSRRNVKGEIPRELNNMEGLTELWLDGNLLTGQLPDMSNLINLKIVHLENNKLTGPLPSYLGSLPSLQALFIQNNSFTGEIPAGLVSGKIIFNYDDNPGLHRGNKKHFQLMLGISIGVLVILLILFLASLVLLCNLRRKASQQKHDEKGISGRSTKPLTGYSFGPGGSLMDEGTAYYITLSELKEATNNFSKKIGKGSFGSVYYGKMRDGKEVAVKTMTDPSSHGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHGHIQDCSNPKPLDWLARLRIAEDAAKDFFPFWNRYYANQQLTEKSDVYSFGVVLLELISGRKPVSSEDYGPEMNIVHWARSLIRKGDVISIMDPSLVGNVKTESIWRVAEIAMQCVEQHGVSRPRMQEVILAIQDASKIEKGIENQLKLSSSGSSKPYSSRKTLLTSFLEIESPDLSNGCLPSAR 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi435g00038 577 Gene3D Transferase(Phosphotransferase) domain 1 288 419 - -
Sebi435g00038 577 SUPERFAMILY Protein kinase-like (PK-like) 290 524 IPR011009 -
Sebi435g00038 577 Gene3D Transferase(Phosphotransferase) domain 1 425 546 - -
Sebi435g00038 577 FunFam receptor-like serine/threonine-protein kinase NCRK 286 381 - -
Sebi435g00038 577 Pfam Malectin-like domain 11 61 IPR024788 -
Sebi435g00038 577 Gene3D Ribonuclease Inhibitor 69 211 IPR032675 -
Sebi435g00038 577 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 108 199 - -
Sebi435g00038 577 PANTHER OS07G0107800 PROTEIN-RELATED 426 528 - -
Sebi435g00038 577 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Sebi435g00038 577 ProSiteProfiles Protein kinase domain profile. 306 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi435g00038 577 MobiDBLite consensus disorder prediction 262 283 - -
Sebi435g00038 577 Pfam Protein tyrosine and serine/threonine kinase 430 522 IPR001245 GO:0004672|GO:0006468
Sebi435g00038 577 Pfam Protein tyrosine and serine/threonine kinase 308 409 IPR001245 GO:0004672|GO:0006468
Sebi435g00038 577 SUPERFAMILY L domain-like 97 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi435g00038 Sebi-Chr435 902603 906260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi435g00038 1 577 Receptor kinase-like Gene Family AT1G67720 59.177 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi435g00038 PK_Tyr_Ser-Thr 6.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi435g00038 - - gmx:100807148 929.472