Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi435g00023 ATGGCTGAGGAGGTCAACCACCATCACACTTTGAAGGTGTTAGAGAATTGTCAAATTAGTCCTCCACCAGCTTCAGTCCCATCATCCTCCTTACCTTTAAGCCACCTTGACTTCCCTTTCTTTTACTGTGCCCCAGTGAAGCAAATTTTCTTCTATGATTTCCCTCATCCAACACAGCACTTCCTTCAAACTGTGCTTCCCACTCTCAAACACTCTCTTTCACTCACTCTCCAACACTTCTTCCCTTTCGCTGCTAATCTCGTCTTCCCTCCAGATCCAAACCTTCCTCACATACTCTACTCCGAAGGTGACTCTGTTTCCTTCTCTGTTTCAGAATCCACTACACATCACTTCACCCACCTCTTGTCTAACACCCCAAGAGAAATTACTCATGAACAACCTTTTATTCCCTCACTTCCTTCACCACGCACGTTAAAAGATGGCACCTTGTTGTTCCCAACCATGGCCATTCAGGTCACAGTTTTCCCTAACTCTGGTTTCACCATCTGCATCTCGTTTAGGCATGAGGTTGCAGATGCATACTCATTTCATCATTTCATGAAATTTTGGGCCTTTATATCAAAAAAAGGAGACCCACCTTCTGAGATTCCACTGCCATTGCACAATAGGGAAATGATTAAAGACACAAAAGGACTTAAGCCTGTTTTGTTGGAGAATTTGAGGAATTTCCCACCCAAGAACCCTAACGAGTATAAAACTCCTCATAGTGACTTGGTGCGTCATAGATTCACGCTGAGCCGTAACCAAGTTGAAAAACTAAAGAAATGGGTGGCTATTAAAGCTCAAAATTGGCGAAACCGTTCTGGGGATTCAATTCCATCCAACTACTTTGGAAATTGCTTGACCAGTTGCTATGCGGTACTTCCAAAGAGCAAGCTTGTGGGAGAAAATGGCATTTGTGAGGCAATGAATGCTATTGGAAGCAAAATTAGAGGTCTCAAGAGTGAAGCTTTTAAAGGGGTTGAATTGTTTGAGTCATCTCATAAATTTTCGCACTCGGGGGAAAAGGATTGGTCGCATTTGGTACAAGTTGTAGGCTCACCAAAGCACAATGTGTATGGGACTGACTTTGGGTGGGGAAAGCCCAAATTGGGTGAAATGCTTCATGCTGATAATTCAACAACAATGTGCCCTTCTGATTGTAGGGACCAAGATTCCGCCATTGAAGTTGAGCTGGTACAAAAACCACTTCAAATGAAAAAATTCAGTGCCATCTGGGAACAACAACTTGGAGATATTATTGCGGTTTCTTGA 1275 0.4306 MAEEVNHHHTLKVLENCQISPPPASVPSSSLPLSHLDFPFFYCAPVKQIFFYDFPHPTQHFLQTVLPTLKHSLSLTLQHFFPFAANLVFPPDPNLPHILYSEGDSVSFSVSESTTHHFTHLLSNTPREITHEQPFIPSLPSPRTLKDGTLLFPTMAIQVTVFPNSGFTICISFRHEVADAYSFHHFMKFWAFISKKGDPPSEIPLPLHNREMIKDTKGLKPVLLENLRNFPPKNPNEYKTPHSDLVRHRFTLSRNQVEKLKKWVAIKAQNWRNRSGDSIPSNYFGNCLTSCYAVLPKSKLVGENGICEAMNAIGSKIRGLKSEAFKGVELFESSHKFSHSGEKDWSHLVQVVGSPKHNVYGTDFGWGKPKLGEMLHADNSTTMCPSDCRDQDSAIEVELVQKPLQMKKFSAIWEQQLGDIIAVS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi435g00023 424 PANTHER - 11 417 - -
Sebi435g00023 424 Gene3D - 266 419 IPR023213 -
Sebi435g00023 424 Pfam Transferase family 269 411 - -
Sebi435g00023 424 Pfam Transferase family 23 262 - -
Sebi435g00023 424 Gene3D - 10 236 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi435g00023 Sebi-Chr435 639823 641241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi435g00023 14 369 Monolignol Biosynthesis Gene Families AT5G48930 20.384 9.86e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi435g00023 - - gmx:100782335 407.527