Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi434g00025 ATGGCAAACAGATACTGGGTAGTGTCTCTTCCCGTTCAGAACTCCGCATCTACGCTGTGGAACCAATTGCAACAAAATATCTCCAAACATTCCTTCGACACTCTTCTTTACAGATTCAACATCCCTAATCTCCGTGTCGGAACCCTAGACTCTCTTCTCTCTCTCAGCGATGATCTCGCCAAGTCCAACGCTTTCATGGAAGGAGTTTCGCACAAGATCAGGCGCCAGATTGAGGAACTCGAGAGAATTTCCGGCGTGGAGAGCGGTGGCCTCACCGTCGATGGAGTGCCTGTTGATTCCTACTTAACTAGGTTTGTTTGGGATGAAGCCAAGTACCCGACTATGTCGCCTTTGAAGGAGATCGTGGATGGTATTCACAGTCAAGTGGCAAAGATTGAGGATGATCTCAAGGTTTCCATTTTCTTTCCACTCTTTAGTTTCAGGAATCTGTTAGATTTAGGAAATAGGTAG 471 0.465 MANRYWVVSLPVQNSASTLWNQLQQNISKHSFDTLLYRFNIPNLRVGTLDSLLSLSDDLAKSNAFMEGVSHKIRRQIEELERISGVESGGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHSQVAKIEDDLKVSIFFPLFSFRNLLDLGNR 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi434g00025 156 SUPERFAMILY Vacuolar ATP synthase subunit C 1 139 IPR036132 GO:0015078|GO:0033180|GO:1902600
Sebi434g00025 156 Pfam V-ATPase subunit C 5 139 IPR004907 GO:0033180|GO:0046961|GO:1902600
Sebi434g00025 156 Gene3D - 41 142 - -
Sebi434g00025 156 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 139 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi434g00025 Sebi-Chr434 788295 789026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi434g00025 1 140 Primary Pumps ATPases(2) AT1G12840 83.571 6.83e-83 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi434g00025 K02148 - qsa:O6P43_006088 247.284