Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi433g00024 ATGGATTCTTTGGACCTATTCGAATGCACGACATGGAACTTTGTAGAGCAACACACCATTGAGGGTGCAGAGGGAAGGTTAGATGGCAATGAGGGGAGTGATAATGGTTTTGAGAATGAAGAACATGAGGTTGATGAATATAGGATTAATAGTGGCCCTGATATGAAGAGGGTTGACTTTATTGGTTTAAGTTGTGAGGATGTGAAATTGTACCATTTTCGGAGTCTTGTTGTTTCCTTTGATTTTTATAATACTTATGCACAAAAAAGGGGGTGTGCAGCTCGGAGGTGTAATGTTGTGAAAAATAAGAGAGGTGAAGTAACACAACAAGTCTTTATGTGTTTCAAGGAGGGATTTCGCCTAAAGAAACATTTAGTGAGGGTAGACAGAAAGAAGGAGCCAAGAGCAATGACAAGATGTGGGTGTTTGCTTTTTGTCGTGTCCATTTTCAATGAGAGGCGGGGAGGTGGCATGTCAAAGCTTTCCATGATGAGCACACTCATGGGATATTAG 513 0.4113 MDSLDLFECTTWNFVEQHTIEGAEGRLDGNEGSDNGFENEEHEVDEYRINSGPDMKRVDFIGLSCEDVKLYHFRSLVVSFDFYNTYAQKRGCAARRCNVVKNKRGEVTQQVFMCFKEGFRLKKHLVRVDRKKEPRAMTRCGCLLFVVSIFNERRGGGMSKLSMMSTLMGY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi433g00024 170 Pfam FAR1 DNA-binding domain 81 143 IPR004330 -
Sebi433g00024 170 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi433g00024 Sebi-Chr433 528284 529284 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi433g00024 FAR1 2.3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi433g00024 - - adu:110280242 100.523