Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi433g00017 ATGGAGAAGACAGGAGTGGTAGTGTTATCGGCGAAAGAGGCATTCGAGAAGCTTGAGAAGGTTGGAGAAGGGACATATGGGAAGGTGTACAGGGCAAGAGAAAAGGCAACTGGGAAGATCGTTGCTCTCAAGAAGACTCGCCTCCATGAGGACGAAGAAGGTGTCCCTCCCACCACTCTTCGTGAAGTTTCCATTCTGCGAATGCTCTCCCGCGATCCCCATGTCGTCAAGTTAATGGATGTGAAACAGGGTCAGAACAAGGAAGGGAAGACGGTGCTCTACTTGGTCTTTGAGTACATGGATACTGATCTCAAGAAATACATTCGCAGTTTCCGTCAAACCGGAGAAAACATTCCACCCAAAACTGTCAAAGTAGAGCTTGATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCACGGCCATGGAATCTTGCACAGGTAGCGTATCTTCCTTCTTCATTTAGAATGGACTTGAAGCCTCACAATCTCTTGATGGACCGAAAAACAATGATGCTTAAAATAGCTGATCTTGGACTTGCTCGAGCATTTACTGTGCCAATTAAGGAGTACACACATGAGATACTAACCCTGTGGTATAGAGCTCCTGAAGTCCTTATGGGAGCGACCCATTACTCAATGGCAGTGGATATGTGGTCTGTTGCCTGCATATTTGCTGAACTTGTCACCAAGCAAGCACTCTTTCCTGGTGATTCTGAGCTGCAACAACTCCTTCATATATTCAGGCTGTTGGGCACTCCTAATGAAGAGGTGTGGCCAGGCGTTAGTAAACTAATGAATTGGCATGAATACCCCCAGTGGAGACCTCAGAGTCTGTCAACTGCTGTACCAACTTTGGATGAGCTTGGACTTGATCTACTATCTCAAATGTTGCAATATGAACCTTCCAAGCGGATTTCTGCGAAGAAAGCTATGGAACACCCTTACTTTGATGACCTGGACAAGACCTATCTTTAG 975 0.4615 MEKTGVVVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVKLMDVKQGQNKEGKTVLYLVFEYMDTDLKKYIRSFRQTGENIPPKTVKVELDVPTLQGCCFLPRPWNLAQVAYLPSSFRMDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKEYTHEILTLWYRAPEVLMGATHYSMAVDMWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWRPQSLSTAVPTLDELGLDLLSQMLQYEPSKRISAKKAMEHPYFDDLDKTYL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi433g00017 324 PANTHER CELL DIVISION PROTEIN KINASE 13 317 - -
Sebi433g00017 324 FunFam Cyclin-dependent kinase 2 103 323 - -
Sebi433g00017 324 Gene3D Transferase(Phosphotransferase) domain 1 154 323 - -
Sebi433g00017 324 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Sebi433g00017 324 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Sebi433g00017 324 FunFam Cyclin-dependent kinase B2,2 11 101 - -
Sebi433g00017 324 SMART serkin_6 15 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi433g00017 324 ProSiteProfiles Protein kinase domain profile. 15 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi433g00017 324 Pfam Protein kinase domain 15 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi433g00017 324 SUPERFAMILY Protein kinase-like (PK-like) 11 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi433g00017 Sebi-Chr433 367878 369464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi433g00017 1 324 Core Cell Cycle Gene Families AT1G20930 77.301 0.0 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Sebi433g00017 Pkinase 5.5e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi433g00017 K07760 - gmx:100808302 539.65