Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi433g00016 ATGCGTCTTGGGACCCCTTCCTCCCTCTCCCGTATTTTATTCCCCACGTCAAGGACGGAAAGTACTGCTTCTGCTGCGGGTTCTATTCCCCACCCAAGTAGCACACGATTTATTGCTTATGAAGAACTTAAAGAAGCAGCAAACAATTTTGAACCAGCGAGTGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTATCTTAAATGATGGTACTTCTGTAGCAATTAAGAGGCTTACAAGTGGAGGGCAACAAGGTGACAAAGAGTTTCTGGTTGAGGTTGAAATGCTTAGCCGATTGCATCACCGTAACCTTGTAAAACTGGTGGGATACTATAGTAGTCATGACTTATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAAGCTTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATAAAAATTGCTCTTGATGCTGCAAGAGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTATTATACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGATCTAATTATTTGTCTACTTGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACCGGGCACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGCTAGGCCAATCCTGAGAGACAAGGATCGGCTGGAAGAGATTGTTGATCCCAAACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTTCGTGTGTGCACTATTGTTGCAGCTTGTGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGTCCTCTAGCACTTTTGAGTTTGACGGAACATCTTCAATGTTCTCCTCATGTCCTTACTCTGGTCTAAGTGCCGCCTTTGACAATGAGAACATTTCTAGGACGGTGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 1020 0.4382 MRLGTPSSLSRILFPTSRTESTASAAGSIPHPSSTRFIAYEELKEAANNFEPASVLGEGGFGRVFKGILNDGTSVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSHDLSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRIKIALDAARGLSYLHEDSQPCVLYRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTCVMGTFGYVAPEYAMTGHLLVKSDVYSYGARPILRDKDRLEEIVDPKLGGKYPKEDFVRVCTIVAACVAPEASQRPTMGEVSSSTFEFDGTSSMFSSCPYSGLSAAFDNENISRTVVFSEDLHEGR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi433g00016 339 Gene3D Phosphorylase Kinase; domain 1 15 127 - -
Sebi433g00016 339 ProSiteProfiles Protein kinase domain profile. 50 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi433g00016 339 FunFam Receptor-like serine/threonine-protein kinase ALE2 30 127 - -
Sebi433g00016 339 PANTHER OS01G0750732 PROTEIN 22 296 - -
Sebi433g00016 339 Pfam Protein kinase domain 53 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi433g00016 339 FunFam Os07g0541700 protein 128 218 - -
Sebi433g00016 339 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Sebi433g00016 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Sebi433g00016 339 SUPERFAMILY Protein kinase-like (PK-like) 26 296 IPR011009 -
Sebi433g00016 339 Gene3D Transferase(Phosphotransferase) domain 1 128 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi433g00016 Sebi-Chr433 361770 363307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi433g00016 18 339 Receptor kinase-like Gene Family AT4G02010 70.449 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sebi433g00016 Pkinase 3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi433g00016 - - gmx:100793528 565.074