Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi432g00049 ATGGCAGAAATTGCGGTGAACCTGGTGATAGGCAAGTTGATTCCATTGCTGAGATATGAAATGACAGTGCTGAAAGAGGTGCACAATCAAGTGGTGGACATCAAGGATCAATTAGGCCTGATACGAGCATACCTGAGGGATGCAGACGTGAAAGCAGATAGAGAAGAAAGGAGTGATGTGGTGAAAGAGTGGGTGAAGCAGGTGAGAGAAGTAGCACATCGAATAGAAGATGTGATCGATGAATACCTGCTCCAAGTTGCAGAGCGGAGGCAAAAGCGTGGAATAATTGGTGTGGTAGAGAAGATAGCGCGGTTGTTGAGAAGCATAGAGCCGCGACGTGTGATAACCGCAGAGATTCGTGATATCAACACAGTGATAGCCACACTTGATAAGAGGAAAGACGTTTTGGGGTTCAATCCAATTACGGAGTCAAGCAGTGGTGCAAAGACTATTACTACGGTGTCAGGGCATGACCTTCGAAGGGCTGCACTGTTCCTTGATGATGCTAAGCTTGTGGGAATCAACGATTCAAAAAAGAAACTCAAGAGCTTGCTGGTCGAGGAAGATTCTAGACGCACCATCATCGCCGTCGTTGGCACCGGGGGACTCGGTAAAACAACAATTACGAGGAAACTATACGAGAAGCAGAAAGAAAAAAGGTTCGATTGTGGTGCTTGGGTCCCTGTATCTAGCACATTTAAGCAGAAGAAAATATTCAAGTTGATGTTGCAAAGTTTTTATGATCAGGAGGATGACGATGATGACTCTAAGGCCATGTTAATTGAGAAAATGAACAAGGACACTATGATAAGAAAAGTGAGAGAATATTTGCAAGAAAGGAGCTATATAATTGTGTTTGACGATGTTTGGGAAGAAGATTTCTGGGGGCGTGTGGAATTTGCATTACCAGAAAATAACAAAGGAAGCAGGATACTCATCACAACAAGACACAAAGGTGTTGCTCAATTTTGCAAGAGTTATGCACATGTTCATATCCACGAGTTACAACGTTTACGTTCAAGTGATGCCATGGAACTATTCCATCTCAAGGCATTTCAGTTTCAGTCACAAGGTTGTCCCAAAGAGCTAATGAGATTGTCAGAAGACATTGTGAAGAAGTGTGATGGAGTTCCACTTGCAATTGTGGCCATTGCCAGCCTCCTCTCCACAAAAAACAACAACATTTCTGAATGGCAAAAGGTTCATGATAGTCTTGGCTCAAGACTAGCAAGTGACCCTCATCTTAAAAGCTTCAACCAAGTTTTATCAGAAAGTTACCATGATCTTCCTTCCCACCTCAAGCCATGTCTCTTATACTTTGGCCTTTTCCCTGATGACTACTCCATCAGTTGTGCTAGACTTATTCGTTTATGGATAGCAGAGGGATTGGTGAATGTGAAAGAGAATGAAAATCGTACCCCTGAGGAAGTTGCAGAGGAGTACCTGGATGAATTGATTCAAAGAAGTTTGGTTACAGTGTCTACAGAGTCTCTTAATGGCATGCCAAAAAGTTGCAGGGTGCATGATCTGTTACATGACTTTATTAAAGGAAAGTGTTCGGAGGTGGACTTTTGTCAAGTGATAAAAAATGAAAACTTTACCTTCAATGCAACAACTAGACGCTTGTCAATCCAATTGCAACCTAACAAGGAAGATGCTGCTCTTGAAAGAGTTATTGTTGCAGATCATGGTCGAGTGAGGTTTTGTTTTGCTTTTAACTTTGATGAGATGCCAAAGCCTCTATTGAAATCGTTCTTCTCCAGCTTCAAGCTCTTGGTAGGATTGGATTTTGAAGATTCCCCTCTTGATCATCTTCCTGATGCAGTTGGATACTTGTTGCATCTCAAGTACTTGAACTTAAAGAACACCAAAATTAAGACACTTCCAAAGTTCATTGGTAAGCTTCAGAACCTAGAGACTCTAGATATAAAATACACTCAAGTGCAAGAGTTACCTAGTGAGATTAACAAGCTCACTAAGCTTCGCCATCTTCTGGCATATTCTATCAATGTTGAAATTGAATTCAGCTCAGCATCTATGCAAGGAGTGATGCTATCAAGAGTTGATATGACTAATGGAGATAGCCTAATCAAGGAAGTGAAAAATTTGAAGCAATTGAGGAGACTTGGCATTGTCAAACTAAGAAGACATAATGGAAAACCATTATGCAGTGCAATAGAGGGCATGGTGCATCTTCAGTCTTTAAGCATTGCATCAGCAGAGGAGCATGAAATTCTTGACCTGCATTCATTGGTAAATCCTCCTCATCTCCATCTACACCGCCTTTACTTGCATGGGCGTATAGAAACTGTGCCACTCTGGATTCCAAAACTCCATGTTTTGGTGAGGCTATTCTTGAATTGGTCAGGACTAATGGAAGATCCACTGCCATTTCTTAAAGACTTGCCGGAGTTGTTGGAGCTTGAGCTTTATAATGCATTTGAAGGTGTTGAGTTGTATATAGGAAAGGGTTGGTTCAAAAAGTTGAAGGAGTTACGACTAGAAAAGATGAAAGCCTTGAAGACCTTAAAAATAGATAGAGGAGCACTGCCTCTTCTTGAAAAGCTGACAATTGGGCCATGCCCTCAAATGGAGGAGATTCCTCATGATATCCAGAATCTACAAGCTCTCCAACATCTTCGGTTCTATGAAATGCCTATGAACACAACGAAGGAGAAAGGCTATGACATATTGAAGAATATACCATTTGTGATTTATTCCAAGGGCAACAAGTTTTACACTCTTCATAGTGATACAGGGGATGAAACTGATGACTTTTAA 2781 0.4135 MAEIAVNLVIGKLIPLLRYEMTVLKEVHNQVVDIKDQLGLIRAYLRDADVKADREERSDVVKEWVKQVREVAHRIEDVIDEYLLQVAERRQKRGIIGVVEKIARLLRSIEPRRVITAEIRDINTVIATLDKRKDVLGFNPITESSSGAKTITTVSGHDLRRAALFLDDAKLVGINDSKKKLKSLLVEEDSRRTIIAVVGTGGLGKTTITRKLYEKQKEKRFDCGAWVPVSSTFKQKKIFKLMLQSFYDQEDDDDDSKAMLIEKMNKDTMIRKVREYLQERSYIIVFDDVWEEDFWGRVEFALPENNKGSRILITTRHKGVAQFCKSYAHVHIHELQRLRSSDAMELFHLKAFQFQSQGCPKELMRLSEDIVKKCDGVPLAIVAIASLLSTKNNNISEWQKVHDSLGSRLASDPHLKSFNQVLSESYHDLPSHLKPCLLYFGLFPDDYSISCARLIRLWIAEGLVNVKENENRTPEEVAEEYLDELIQRSLVTVSTESLNGMPKSCRVHDLLHDFIKGKCSEVDFCQVIKNENFTFNATTRRLSIQLQPNKEDAALERVIVADHGRVRFCFAFNFDEMPKPLLKSFFSSFKLLVGLDFEDSPLDHLPDAVGYLLHLKYLNLKNTKIKTLPKFIGKLQNLETLDIKYTQVQELPSEINKLTKLRHLLAYSINVEIEFSSASMQGVMLSRVDMTNGDSLIKEVKNLKQLRRLGIVKLRRHNGKPLCSAIEGMVHLQSLSIASAEEHEILDLHSLVNPPHLHLHRLYLHGRIETVPLWIPKLHVLVRLFLNWSGLMEDPLPFLKDLPELLELELYNAFEGVELYIGKGWFKKLKELRLEKMKALKTLKIDRGALPLLEKLTIGPCPQMEEIPHDIQNLQALQHLRFYEMPMNTTKEKGYDILKNIPFVIYSKGNKFYTLHSDTGDETDDF 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi432g00049 926 PANTHER DISEASE RESISTANCE PROTEIN RP 62 843 IPR044974 GO:0006952
Sebi432g00049 926 Pfam NB-ARC domain 176 427 IPR002182 GO:0043531
Sebi432g00049 926 FunFam Probable disease resistance protein At1g63360 426 516 - -
Sebi432g00049 926 Gene3D - 425 519 IPR036388 -
Sebi432g00049 926 FunFam Probable disease resistance protein At1g61300 157 329 - -
Sebi432g00049 926 CDD RX-CC_like 2 124 IPR038005 -
Sebi432g00049 926 Gene3D - 337 424 IPR042197 -
Sebi432g00049 926 Gene3D - 149 332 IPR027417 -
Sebi432g00049 926 Gene3D - 4 116 - -
Sebi432g00049 926 Gene3D Ribonuclease Inhibitor 568 905 IPR032675 -
Sebi432g00049 926 Pfam Rx N-terminal domain 5 92 IPR041118 -
Sebi432g00049 926 PRINTS Disease resistance protein signature 194 209 - -
Sebi432g00049 926 PRINTS Disease resistance protein signature 276 290 - -
Sebi432g00049 926 PRINTS Disease resistance protein signature 374 388 - -
Sebi432g00049 926 PRINTS Disease resistance protein signature 633 649 - -
Sebi432g00049 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 440 IPR027417 -
Sebi432g00049 926 SUPERFAMILY L domain-like 506 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi432g00049 Sebi-Chr432 886510 890830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi432g00049 195 381 WRKY Transcription Factor Family AT5G45050 23.958 2.18e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi432g00049 K13457 - csin:114256860 717.613