Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi432g00045 ATGAAGAGTGAAGGGTATTGGAGAAGAAAGAGTCAACCTGGGAAAGCCCGGAGAATTCTTGTTGGAGGGTATTTGTCGGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTGTTCCCAGAAACATCCAATCTAACGAGAGAAAATCCCCCAATTGCATCTTTTATCGTTCGGGTGGTTAGTTCTGTTGGAGATCGCAAGGCCCTCACACATCCAGAAATAAAGGACAAATTGATCAAGAACAATGAGGACTTTGTTTGGGCAATTGAGGTTCCACTGACTGGGAAATTCATTATTGACGTTGAGTTCCTTGATTTGAAGACCACATCCCCAAACGGTGGAGAACCTTGCTCTATCTGGGCTGAAGGTTTTACTCAGAAAAGATCAAATGCAAAAGCAATAGAGTCTCTTGGTAGAATGCTAACAGAAGGCATCCACACAGACATAACCATCAATGCTTCTGATGGAAGCATAGGAGCTCATCGAGCTGTTCTTGCTGCCAGGTCACCTGTATTCCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGCTTTCAACCATAAACATCTCAGACATGTCAATTGAAGCTTGCCAAGCTTTTCTCAATTATCTTTATGGCATCATCAAAAATGAAGAATTTCTCACACATAGGCTTGCCCTTCTACATGCAGCTGACAAGTATGACATATCTGACTTGAGAGAGGCATGCCATGAGAGTCTTCTAGAAGACATTGATACAAAAAATGTACTTGAGAGGCTCCAAAATGCATCACTATATCAGCTGATGAAACTGAAGATGAGCTGTATCCGATACCTTGTGAAATTTGGCAAAATATTTGAAATTAAGGATGATTTCAATACCTTCCTGCAAAATGCAGACAGGGATCTCATTGCTGAAGTCTTCCATGAAGTTCTTGATGCATGGAAAGGATTCTGA 936 0.4124 MKSEGYWRRKSQPGKARRILVGGYLSVEKNRVLFVKLFPETSNLTRENPPIASFIVRVVSSVGDRKALTHPEIKDKLIKNNEDFVWAIEVPLTGKFIIDVEFLDLKTTSPNGGEPCSIWAEGFTQKRSNAKAIESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSIEACQAFLNYLYGIIKNEEFLTHRLALLHAADKYDISDLREACHESLLEDIDTKNVLERLQNASLYQLMKLKMSCIRYLVKFGKIFEIKDDFNTFLQNADRDLIAEVFHEVLDAWKGF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi432g00045 311 SMART BTB_4 146 244 IPR000210 GO:0005515
Sebi432g00045 311 CDD BTB_POZ_ZBTB_KLHL-like 145 227 - -
Sebi432g00045 311 ProSiteProfiles BTB domain profile. 146 205 IPR000210 GO:0005515
Sebi432g00045 311 Pfam BTB/POZ domain 139 242 IPR000210 GO:0005515
Sebi432g00045 311 Gene3D Potassium Channel Kv1.1; Chain A 123 274 IPR011333 -
Sebi432g00045 311 SUPERFAMILY POZ domain 132 242 IPR011333 -
Sebi432g00045 311 PANTHER OS08G0495500 PROTEIN-RELATED 9 310 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi432g00045 Sebi-Chr432 835435 837818 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sebi432g00045 BTB 2.9e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi432g00045 K10523 - gmx:100790186 550.821